Gene : Brara.F01869 B. rapa FPsc v1.3
Defline:  (1 of 11) 4.1.1.15 - Glutamate decarboxylase / L-glutamate 1-carboxy-lyase Genomic Order:  1869
Name:  ? Brara.F01869 Secondary Identifier:  ? PAC:30629657
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc GLUDEG-I-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY0-1305 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-4321 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F01869 0.5kb upstream 0.5kb upstream 6598 true A06: 12371440-12378037 Brassica rapa FPsc
Brara.F01869 0.5kb upstream 0.5kb upstream 500 false A06: 12377538-12378037 Brassica rapa FPsc
Brara.F01869 0.5kb downstream 0.5kb downstream 6598 true A06: 12370940-12377537 Brassica rapa FPsc
Brara.F01869 0.5kb downstream 0.5kb downstream 500 false A06: 12370940-12371439 Brassica rapa FPsc
Brara.F01869 1.0kb upstream 1.0kb upstream 7098 true A06: 12371440-12378537 Brassica rapa FPsc
Brara.F01869 1.0kb upstream 1.0kb upstream 1000 false A06: 12377538-12378537 Brassica rapa FPsc
Brara.F01869 1.0kb downstream 1.0kb downstream 7098 true A06: 12370440-12377537 Brassica rapa FPsc
Brara.F01869 1.0kb downstream 1.0kb downstream 1000 false A06: 12370440-12371439 Brassica rapa FPsc
Brara.F01869 2.0kb upstream 2.0kb upstream 8098 true A06: 12371440-12379537 Brassica rapa FPsc
Brara.F01869 2.0kb upstream 2.0kb upstream 2000 false A06: 12377538-12379537 Brassica rapa FPsc
Brara.F01869 2.0kb downstream 2.0kb downstream 8098 true A06: 12369440-12377537 Brassica rapa FPsc
Brara.F01869 2.0kb downstream 2.0kb downstream 2000 false A06: 12369440-12371439 Brassica rapa FPsc
Brara.F01869 5.0kb upstream 5.0kb upstream 11098 true A06: 12371440-12382537 Brassica rapa FPsc
Brara.F01869 5.0kb upstream 5.0kb upstream 5000 false A06: 12377538-12382537 Brassica rapa FPsc
Brara.F01869 5.0kb downstream 5.0kb downstream 11098 true A06: 12366440-12377537 Brassica rapa FPsc
Brara.F01869 5.0kb downstream 5.0kb downstream 5000 false A06: 12366440-12371439 Brassica rapa FPsc
Brara.F01869 10.0kb upstream 10.0kb upstream 16098 true A06: 12371440-12387537 Brassica rapa FPsc
Brara.F01869 10.0kb upstream 10.0kb upstream 10000 false A06: 12377538-12387537 Brassica rapa FPsc
Brara.F01869 10.0kb downstream 10.0kb downstream 16098 true A06: 12361440-12377537 Brassica rapa FPsc
Brara.F01869 10.0kb downstream 10.0kb downstream 10000 false A06: 12361440-12371439 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122350542 5261 Brassicaceae Singleton cluster - no MSA
123789554 5264 Brassicales-Malvales Singleton cluster - no MSA
124287552 5266 SBM Singleton cluster - no MSA
124252218 5268 Malvidae View MSA
124038575 5270 Rosid View MSA
123743649 5271 Pentapetalae View MSA
122770727 5272 Eudicot View MSA
122049942 5273 Angiosperm View MSA
123429259 5275 Viridiplantae View MSA
121311658 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier