Gene : Brara.D00537 B. rapa FPsc v1.3
Defline:  (1 of 7) PTHR10362//PTHR10362:SF19 - HISTIDINE AMMONIA-LYASE Genomic Order:  537
Name:  ? Brara.D00537 Secondary Identifier:  ? PAC:30621979
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-1121 Brassica rapa FPsc pathologic  
BrapaFPsc PWY1F-467 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7186 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D00537 0.5kb upstream 0.5kb upstream 3182 true A04: 4048308-4051489 Brassica rapa FPsc
Brara.D00537 0.5kb upstream 0.5kb upstream 500 false A04: 4048308-4048807 Brassica rapa FPsc
Brara.D00537 0.5kb downstream 0.5kb downstream 3182 true A04: 4048808-4051989 Brassica rapa FPsc
Brara.D00537 0.5kb downstream 0.5kb downstream 500 false A04: 4051490-4051989 Brassica rapa FPsc
Brara.D00537 1.0kb upstream 1.0kb upstream 3682 true A04: 4047808-4051489 Brassica rapa FPsc
Brara.D00537 1.0kb upstream 1.0kb upstream 1000 false A04: 4047808-4048807 Brassica rapa FPsc
Brara.D00537 1.0kb downstream 1.0kb downstream 3682 true A04: 4048808-4052489 Brassica rapa FPsc
Brara.D00537 1.0kb downstream 1.0kb downstream 1000 false A04: 4051490-4052489 Brassica rapa FPsc
Brara.D00537 2.0kb upstream 2.0kb upstream 4682 true A04: 4046808-4051489 Brassica rapa FPsc
Brara.D00537 2.0kb upstream 2.0kb upstream 2000 false A04: 4046808-4048807 Brassica rapa FPsc
Brara.D00537 2.0kb downstream 2.0kb downstream 4682 true A04: 4048808-4053489 Brassica rapa FPsc
Brara.D00537 2.0kb downstream 2.0kb downstream 2000 false A04: 4051490-4053489 Brassica rapa FPsc
Brara.D00537 5.0kb upstream 5.0kb upstream 7682 true A04: 4043808-4051489 Brassica rapa FPsc
Brara.D00537 5.0kb upstream 5.0kb upstream 5000 false A04: 4043808-4048807 Brassica rapa FPsc
Brara.D00537 5.0kb downstream 5.0kb downstream 7682 true A04: 4048808-4056489 Brassica rapa FPsc
Brara.D00537 5.0kb downstream 5.0kb downstream 5000 false A04: 4051490-4056489 Brassica rapa FPsc
Brara.D00537 10.0kb upstream 10.0kb upstream 12682 true A04: 4038808-4051489 Brassica rapa FPsc
Brara.D00537 10.0kb upstream 10.0kb upstream 10000 false A04: 4038808-4048807 Brassica rapa FPsc
Brara.D00537 10.0kb downstream 10.0kb downstream 12682 true A04: 4048808-4061489 Brassica rapa FPsc
Brara.D00537 10.0kb downstream 10.0kb downstream 10000 false A04: 4051490-4061489 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363433 5261 Brassicaceae View MSA
123839790 5264 Brassicales-Malvales View MSA
124346801 5266 SBM View MSA
124254509 5268 Malvidae View MSA
124070450 5270 Rosid View MSA
123747775 5271 Pentapetalae View MSA
122795347 5272 Eudicot View MSA
122043246 5273 Angiosperm View MSA
121351477 5274 Embryophyte View MSA
123382181 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier