Gene : Brara.A01246 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR31803:SF10 - UBIQUINOL OXIDASE 4, CHLOROPLASTIC/CHROMOPLASTIC Genomic Order:  1246
Name:  ? Brara.A01246 Secondary Identifier:  ? PAC:30637554
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-4302 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A01246 0.5kb upstream 0.5kb upstream 2623 true A01: 6624835-6627457 Brassica rapa FPsc
Brara.A01246 0.5kb upstream 0.5kb upstream 500 false A01: 6626958-6627457 Brassica rapa FPsc
Brara.A01246 0.5kb downstream 0.5kb downstream 2623 true A01: 6624335-6626957 Brassica rapa FPsc
Brara.A01246 0.5kb downstream 0.5kb downstream 500 false A01: 6624335-6624834 Brassica rapa FPsc
Brara.A01246 1.0kb upstream 1.0kb upstream 3123 true A01: 6624835-6627957 Brassica rapa FPsc
Brara.A01246 1.0kb upstream 1.0kb upstream 1000 false A01: 6626958-6627957 Brassica rapa FPsc
Brara.A01246 1.0kb downstream 1.0kb downstream 3123 true A01: 6623835-6626957 Brassica rapa FPsc
Brara.A01246 1.0kb downstream 1.0kb downstream 1000 false A01: 6623835-6624834 Brassica rapa FPsc
Brara.A01246 2.0kb upstream 2.0kb upstream 4123 true A01: 6624835-6628957 Brassica rapa FPsc
Brara.A01246 2.0kb upstream 2.0kb upstream 2000 false A01: 6626958-6628957 Brassica rapa FPsc
Brara.A01246 2.0kb downstream 2.0kb downstream 4123 true A01: 6622835-6626957 Brassica rapa FPsc
Brara.A01246 2.0kb downstream 2.0kb downstream 2000 false A01: 6622835-6624834 Brassica rapa FPsc
Brara.A01246 5.0kb upstream 5.0kb upstream 7123 true A01: 6624835-6631957 Brassica rapa FPsc
Brara.A01246 5.0kb upstream 5.0kb upstream 5000 false A01: 6626958-6631957 Brassica rapa FPsc
Brara.A01246 5.0kb downstream 5.0kb downstream 7123 true A01: 6619835-6626957 Brassica rapa FPsc
Brara.A01246 5.0kb downstream 5.0kb downstream 5000 false A01: 6619835-6624834 Brassica rapa FPsc
Brara.A01246 10.0kb upstream 10.0kb upstream 12123 true A01: 6624835-6636957 Brassica rapa FPsc
Brara.A01246 10.0kb upstream 10.0kb upstream 10000 false A01: 6626958-6636957 Brassica rapa FPsc
Brara.A01246 10.0kb downstream 10.0kb downstream 12123 true A01: 6614835-6626957 Brassica rapa FPsc
Brara.A01246 10.0kb downstream 10.0kb downstream 10000 false A01: 6614835-6624834 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374610 5261 Brassicaceae View MSA
123829410 5264 Brassicales-Malvales View MSA
124343914 5266 SBM View MSA
124237167 5268 Malvidae View MSA
124073832 5270 Rosid View MSA
123736785 5271 Pentapetalae View MSA
122786368 5272 Eudicot View MSA
122045919 5273 Angiosperm View MSA
121344765 5274 Embryophyte View MSA
123427941 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier