Gene : Brara.A01231 B. rapa FPsc v1.3
Defline:  (1 of 47) PF03108//PF04434//PF10551 - MuDR family transposase (DBD_Tnp_Mut) // SWIM zinc finger (SWIM) // MULE transposase domain (MULE) Genomic Order:  1231
Name:  ? Brara.A01231 Secondary Identifier:  ? PAC:30637510
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A01231 0.5kb upstream 0.5kb upstream 3880 true A01: 6558169-6562048 Brassica rapa FPsc
Brara.A01231 0.5kb upstream 0.5kb upstream 500 false A01: 6558169-6558668 Brassica rapa FPsc
Brara.A01231 0.5kb downstream 0.5kb downstream 3880 true A01: 6558669-6562548 Brassica rapa FPsc
Brara.A01231 0.5kb downstream 0.5kb downstream 500 false A01: 6562049-6562548 Brassica rapa FPsc
Brara.A01231 1.0kb upstream 1.0kb upstream 4380 true A01: 6557669-6562048 Brassica rapa FPsc
Brara.A01231 1.0kb upstream 1.0kb upstream 1000 false A01: 6557669-6558668 Brassica rapa FPsc
Brara.A01231 1.0kb downstream 1.0kb downstream 4380 true A01: 6558669-6563048 Brassica rapa FPsc
Brara.A01231 1.0kb downstream 1.0kb downstream 1000 false A01: 6562049-6563048 Brassica rapa FPsc
Brara.A01231 2.0kb upstream 2.0kb upstream 5380 true A01: 6556669-6562048 Brassica rapa FPsc
Brara.A01231 2.0kb upstream 2.0kb upstream 2000 false A01: 6556669-6558668 Brassica rapa FPsc
Brara.A01231 2.0kb downstream 2.0kb downstream 5380 true A01: 6558669-6564048 Brassica rapa FPsc
Brara.A01231 2.0kb downstream 2.0kb downstream 2000 false A01: 6562049-6564048 Brassica rapa FPsc
Brara.A01231 5.0kb upstream 5.0kb upstream 8380 true A01: 6553669-6562048 Brassica rapa FPsc
Brara.A01231 5.0kb upstream 5.0kb upstream 5000 false A01: 6553669-6558668 Brassica rapa FPsc
Brara.A01231 5.0kb downstream 5.0kb downstream 8380 true A01: 6558669-6567048 Brassica rapa FPsc
Brara.A01231 5.0kb downstream 5.0kb downstream 5000 false A01: 6562049-6567048 Brassica rapa FPsc
Brara.A01231 10.0kb upstream 10.0kb upstream 13380 true A01: 6548669-6562048 Brassica rapa FPsc
Brara.A01231 10.0kb upstream 10.0kb upstream 10000 false A01: 6548669-6558668 Brassica rapa FPsc
Brara.A01231 10.0kb downstream 10.0kb downstream 13380 true A01: 6558669-6572048 Brassica rapa FPsc
Brara.A01231 10.0kb downstream 10.0kb downstream 10000 false A01: 6562049-6572048 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380064 5261 Brassicaceae View MSA
123802541 5264 Brassicales-Malvales View MSA
124299729 5266 SBM View MSA
124255746 5268 Malvidae View MSA
124051474 5270 Rosid View MSA
123753345 5271 Pentapetalae View MSA
122797917 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier