Gene : Brara.D00561 B. rapa FPsc v1.3
Defline:  (1 of 2) 1.3.1.70 - Delta(14)-sterol reductase / Sterol C14-reductase Genomic Order:  561
Name:  ? Brara.D00561 Secondary Identifier:  ? PAC:30621978
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-2541 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D00561 0.5kb upstream 0.5kb upstream 3755 true A04: 4245129-4248883 Brassica rapa FPsc
Brara.D00561 0.5kb upstream 0.5kb upstream 500 false A04: 4245129-4245628 Brassica rapa FPsc
Brara.D00561 0.5kb downstream 0.5kb downstream 3755 true A04: 4245629-4249383 Brassica rapa FPsc
Brara.D00561 0.5kb downstream 0.5kb downstream 500 false A04: 4248884-4249383 Brassica rapa FPsc
Brara.D00561 1.0kb upstream 1.0kb upstream 4255 true A04: 4244629-4248883 Brassica rapa FPsc
Brara.D00561 1.0kb upstream 1.0kb upstream 1000 false A04: 4244629-4245628 Brassica rapa FPsc
Brara.D00561 1.0kb downstream 1.0kb downstream 4255 true A04: 4245629-4249883 Brassica rapa FPsc
Brara.D00561 1.0kb downstream 1.0kb downstream 1000 false A04: 4248884-4249883 Brassica rapa FPsc
Brara.D00561 2.0kb upstream 2.0kb upstream 5255 true A04: 4243629-4248883 Brassica rapa FPsc
Brara.D00561 2.0kb upstream 2.0kb upstream 2000 false A04: 4243629-4245628 Brassica rapa FPsc
Brara.D00561 2.0kb downstream 2.0kb downstream 5255 true A04: 4245629-4250883 Brassica rapa FPsc
Brara.D00561 2.0kb downstream 2.0kb downstream 2000 false A04: 4248884-4250883 Brassica rapa FPsc
Brara.D00561 5.0kb upstream 5.0kb upstream 8255 true A04: 4240629-4248883 Brassica rapa FPsc
Brara.D00561 5.0kb upstream 5.0kb upstream 5000 false A04: 4240629-4245628 Brassica rapa FPsc
Brara.D00561 5.0kb downstream 5.0kb downstream 8255 true A04: 4245629-4253883 Brassica rapa FPsc
Brara.D00561 5.0kb downstream 5.0kb downstream 5000 false A04: 4248884-4253883 Brassica rapa FPsc
Brara.D00561 10.0kb upstream 10.0kb upstream 13255 true A04: 4235629-4248883 Brassica rapa FPsc
Brara.D00561 10.0kb upstream 10.0kb upstream 10000 false A04: 4235629-4245628 Brassica rapa FPsc
Brara.D00561 10.0kb downstream 10.0kb downstream 13255 true A04: 4245629-4258883 Brassica rapa FPsc
Brara.D00561 10.0kb downstream 10.0kb downstream 10000 false A04: 4248884-4258883 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122348748 5261 Brassicaceae Singleton cluster - no MSA
123788040 5264 Brassicales-Malvales Singleton cluster - no MSA
124286083 5266 SBM Singleton cluster - no MSA
124250977 5268 Malvidae View MSA
124062943 5270 Rosid View MSA
123743955 5271 Pentapetalae View MSA
122786047 5272 Eudicot View MSA
122044156 5273 Angiosperm View MSA
121351053 5274 Embryophyte View MSA
123426486 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier