Gene : Brara.F01808 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR23315:SF69 - U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED Genomic Order:  1808
Name:  ? Brara.F01808 Secondary Identifier:  ? PAC:30631923
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F01808 0.5kb upstream 0.5kb upstream 3086 true A06: 11531522-11534607 Brassica rapa FPsc
Brara.F01808 0.5kb upstream 0.5kb upstream 500 false A06: 11531522-11532021 Brassica rapa FPsc
Brara.F01808 0.5kb downstream 0.5kb downstream 3086 true A06: 11532022-11535107 Brassica rapa FPsc
Brara.F01808 0.5kb downstream 0.5kb downstream 500 false A06: 11534608-11535107 Brassica rapa FPsc
Brara.F01808 1.0kb upstream 1.0kb upstream 3586 true A06: 11531022-11534607 Brassica rapa FPsc
Brara.F01808 1.0kb upstream 1.0kb upstream 1000 false A06: 11531022-11532021 Brassica rapa FPsc
Brara.F01808 1.0kb downstream 1.0kb downstream 3586 true A06: 11532022-11535607 Brassica rapa FPsc
Brara.F01808 1.0kb downstream 1.0kb downstream 1000 false A06: 11534608-11535607 Brassica rapa FPsc
Brara.F01808 2.0kb upstream 2.0kb upstream 4586 true A06: 11530022-11534607 Brassica rapa FPsc
Brara.F01808 2.0kb upstream 2.0kb upstream 2000 false A06: 11530022-11532021 Brassica rapa FPsc
Brara.F01808 2.0kb downstream 2.0kb downstream 4586 true A06: 11532022-11536607 Brassica rapa FPsc
Brara.F01808 2.0kb downstream 2.0kb downstream 2000 false A06: 11534608-11536607 Brassica rapa FPsc
Brara.F01808 5.0kb upstream 5.0kb upstream 7586 true A06: 11527022-11534607 Brassica rapa FPsc
Brara.F01808 5.0kb upstream 5.0kb upstream 5000 false A06: 11527022-11532021 Brassica rapa FPsc
Brara.F01808 5.0kb downstream 5.0kb downstream 7586 true A06: 11532022-11539607 Brassica rapa FPsc
Brara.F01808 5.0kb downstream 5.0kb downstream 5000 false A06: 11534608-11539607 Brassica rapa FPsc
Brara.F01808 10.0kb upstream 10.0kb upstream 12586 true A06: 11522022-11534607 Brassica rapa FPsc
Brara.F01808 10.0kb upstream 10.0kb upstream 10000 false A06: 11522022-11532021 Brassica rapa FPsc
Brara.F01808 10.0kb downstream 10.0kb downstream 12586 true A06: 11532022-11544607 Brassica rapa FPsc
Brara.F01808 10.0kb downstream 10.0kb downstream 10000 false A06: 11534608-11544607 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027848 5273 Angiosperm View MSA
122351041 5261 Brassicaceae Singleton cluster - no MSA
123789979 5264 Brassicales-Malvales Singleton cluster - no MSA
124287955 5266 SBM Singleton cluster - no MSA
124255831 5268 Malvidae View MSA
123953317 5270 Rosid View MSA
123530745 5271 Pentapetalae View MSA
122565690 5272 Eudicot View MSA
121349135 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier