Gene : Brara.A01286 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR31100:SF15 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 24-RELATED Genomic Order:  1286
Name:  ? Brara.A01286 Secondary Identifier:  ? PAC:30639578
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A01286 0.5kb upstream 0.5kb upstream 1630 true A01: 6856369-6857998 Brassica rapa FPsc
Brara.A01286 0.5kb upstream 0.5kb upstream 500 false A01: 6856369-6856868 Brassica rapa FPsc
Brara.A01286 0.5kb downstream 0.5kb downstream 1630 true A01: 6856869-6858498 Brassica rapa FPsc
Brara.A01286 0.5kb downstream 0.5kb downstream 500 false A01: 6857999-6858498 Brassica rapa FPsc
Brara.A01286 1.0kb upstream 1.0kb upstream 2130 true A01: 6855869-6857998 Brassica rapa FPsc
Brara.A01286 1.0kb upstream 1.0kb upstream 1000 false A01: 6855869-6856868 Brassica rapa FPsc
Brara.A01286 1.0kb downstream 1.0kb downstream 2130 true A01: 6856869-6858998 Brassica rapa FPsc
Brara.A01286 1.0kb downstream 1.0kb downstream 1000 false A01: 6857999-6858998 Brassica rapa FPsc
Brara.A01286 2.0kb upstream 2.0kb upstream 3130 true A01: 6854869-6857998 Brassica rapa FPsc
Brara.A01286 2.0kb upstream 2.0kb upstream 2000 false A01: 6854869-6856868 Brassica rapa FPsc
Brara.A01286 2.0kb downstream 2.0kb downstream 3130 true A01: 6856869-6859998 Brassica rapa FPsc
Brara.A01286 2.0kb downstream 2.0kb downstream 2000 false A01: 6857999-6859998 Brassica rapa FPsc
Brara.A01286 5.0kb upstream 5.0kb upstream 6130 true A01: 6851869-6857998 Brassica rapa FPsc
Brara.A01286 5.0kb upstream 5.0kb upstream 5000 false A01: 6851869-6856868 Brassica rapa FPsc
Brara.A01286 5.0kb downstream 5.0kb downstream 6130 true A01: 6856869-6862998 Brassica rapa FPsc
Brara.A01286 5.0kb downstream 5.0kb downstream 5000 false A01: 6857999-6862998 Brassica rapa FPsc
Brara.A01286 10.0kb upstream 10.0kb upstream 11130 true A01: 6846869-6857998 Brassica rapa FPsc
Brara.A01286 10.0kb upstream 10.0kb upstream 10000 false A01: 6846869-6856868 Brassica rapa FPsc
Brara.A01286 10.0kb downstream 10.0kb downstream 11130 true A01: 6856869-6867998 Brassica rapa FPsc
Brara.A01286 10.0kb downstream 10.0kb downstream 10000 false A01: 6857999-6867998 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122352949 5261 Brassicaceae Singleton cluster - no MSA
123791595 5264 Brassicales-Malvales Singleton cluster - no MSA
124289504 5266 SBM Singleton cluster - no MSA
124255998 5268 Malvidae View MSA
124070322 5270 Rosid View MSA
123746080 5271 Pentapetalae View MSA
122793213 5272 Eudicot View MSA
122046470 5273 Angiosperm View MSA
121310610 5274 Embryophyte View MSA
123348051 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier