Gene : Brara.A01069 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR11177:SF219 - CHITINASE-LIKE PROTEIN-RELATED Genomic Order:  1069
Name:  ? Brara.A01069 Secondary Identifier:  ? PAC:30637145
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6902 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A01069 0.5kb upstream 0.5kb upstream 2513 true A01: 5623245-5625757 Brassica rapa FPsc
Brara.A01069 0.5kb upstream 0.5kb upstream 500 false A01: 5625258-5625757 Brassica rapa FPsc
Brara.A01069 0.5kb downstream 0.5kb downstream 2513 true A01: 5622745-5625257 Brassica rapa FPsc
Brara.A01069 0.5kb downstream 0.5kb downstream 500 false A01: 5622745-5623244 Brassica rapa FPsc
Brara.A01069 1.0kb upstream 1.0kb upstream 3013 true A01: 5623245-5626257 Brassica rapa FPsc
Brara.A01069 1.0kb upstream 1.0kb upstream 1000 false A01: 5625258-5626257 Brassica rapa FPsc
Brara.A01069 1.0kb downstream 1.0kb downstream 3013 true A01: 5622245-5625257 Brassica rapa FPsc
Brara.A01069 1.0kb downstream 1.0kb downstream 1000 false A01: 5622245-5623244 Brassica rapa FPsc
Brara.A01069 2.0kb upstream 2.0kb upstream 4013 true A01: 5623245-5627257 Brassica rapa FPsc
Brara.A01069 2.0kb upstream 2.0kb upstream 2000 false A01: 5625258-5627257 Brassica rapa FPsc
Brara.A01069 2.0kb downstream 2.0kb downstream 4013 true A01: 5621245-5625257 Brassica rapa FPsc
Brara.A01069 2.0kb downstream 2.0kb downstream 2000 false A01: 5621245-5623244 Brassica rapa FPsc
Brara.A01069 5.0kb upstream 5.0kb upstream 7013 true A01: 5623245-5630257 Brassica rapa FPsc
Brara.A01069 5.0kb upstream 5.0kb upstream 5000 false A01: 5625258-5630257 Brassica rapa FPsc
Brara.A01069 5.0kb downstream 5.0kb downstream 7013 true A01: 5618245-5625257 Brassica rapa FPsc
Brara.A01069 5.0kb downstream 5.0kb downstream 5000 false A01: 5618245-5623244 Brassica rapa FPsc
Brara.A01069 10.0kb upstream 10.0kb upstream 12013 true A01: 5623245-5635257 Brassica rapa FPsc
Brara.A01069 10.0kb upstream 10.0kb upstream 10000 false A01: 5625258-5635257 Brassica rapa FPsc
Brara.A01069 10.0kb downstream 10.0kb downstream 12013 true A01: 5613245-5625257 Brassica rapa FPsc
Brara.A01069 10.0kb downstream 10.0kb downstream 10000 false A01: 5613245-5623244 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362004 5261 Brassicaceae View MSA
123831557 5264 Brassicales-Malvales View MSA
124339327 5266 SBM View MSA
124253771 5268 Malvidae View MSA
124068556 5270 Rosid View MSA
123750744 5271 Pentapetalae View MSA
122797322 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier