Gene : Brara.D00465 B. rapa FPsc v1.3
Defline:  (1 of 3) 2.4.2.10 - Orotate phosphoribosyltransferase / Orotidylic acid phosphorylase Genomic Order:  465
Name:  ? Brara.D00465 Secondary Identifier:  ? PAC:30622819
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY0-162 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5686 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7211 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D00465 0.5kb upstream 0.5kb upstream 2676 true A04: 3463426-3466101 Brassica rapa FPsc
Brara.D00465 0.5kb upstream 0.5kb upstream 500 false A04: 3463426-3463925 Brassica rapa FPsc
Brara.D00465 0.5kb downstream 0.5kb downstream 2676 true A04: 3463926-3466601 Brassica rapa FPsc
Brara.D00465 0.5kb downstream 0.5kb downstream 500 false A04: 3466102-3466601 Brassica rapa FPsc
Brara.D00465 1.0kb upstream 1.0kb upstream 3176 true A04: 3462926-3466101 Brassica rapa FPsc
Brara.D00465 1.0kb upstream 1.0kb upstream 1000 false A04: 3462926-3463925 Brassica rapa FPsc
Brara.D00465 1.0kb downstream 1.0kb downstream 3176 true A04: 3463926-3467101 Brassica rapa FPsc
Brara.D00465 1.0kb downstream 1.0kb downstream 1000 false A04: 3466102-3467101 Brassica rapa FPsc
Brara.D00465 2.0kb upstream 2.0kb upstream 4176 true A04: 3461926-3466101 Brassica rapa FPsc
Brara.D00465 2.0kb upstream 2.0kb upstream 2000 false A04: 3461926-3463925 Brassica rapa FPsc
Brara.D00465 2.0kb downstream 2.0kb downstream 4176 true A04: 3463926-3468101 Brassica rapa FPsc
Brara.D00465 2.0kb downstream 2.0kb downstream 2000 false A04: 3466102-3468101 Brassica rapa FPsc
Brara.D00465 5.0kb upstream 5.0kb upstream 7176 true A04: 3458926-3466101 Brassica rapa FPsc
Brara.D00465 5.0kb upstream 5.0kb upstream 5000 false A04: 3458926-3463925 Brassica rapa FPsc
Brara.D00465 5.0kb downstream 5.0kb downstream 7176 true A04: 3463926-3471101 Brassica rapa FPsc
Brara.D00465 5.0kb downstream 5.0kb downstream 5000 false A04: 3466102-3471101 Brassica rapa FPsc
Brara.D00465 10.0kb upstream 10.0kb upstream 12176 true A04: 3453926-3466101 Brassica rapa FPsc
Brara.D00465 10.0kb upstream 10.0kb upstream 10000 false A04: 3453926-3463925 Brassica rapa FPsc
Brara.D00465 10.0kb downstream 10.0kb downstream 12176 true A04: 3463926-3476101 Brassica rapa FPsc
Brara.D00465 10.0kb downstream 10.0kb downstream 10000 false A04: 3466102-3476101 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122348958 5261 Brassicaceae Singleton cluster - no MSA
123840006 5264 Brassicales-Malvales View MSA
124338602 5266 SBM View MSA
124250162 5268 Malvidae View MSA
124060638 5270 Rosid View MSA
123751852 5271 Pentapetalae View MSA
122789079 5272 Eudicot View MSA
122042153 5273 Angiosperm View MSA
121351237 5274 Embryophyte View MSA
123424950 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier