Gene : Brara.A01083 B. rapa FPsc v1.3

Defline:  (1 of 1) PTHR13355:SF12 - GCN5-RELATED N-ACETYLTRANSFERASE (GNAT) FAMILY PROTEIN Genomic Order:  1083
Name:  ? Brara.A01083 Secondary Identifier:  ? PAC:30640389

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc UDPNACETYLGALSYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A01083 0.5kb upstream 0.5kb upstream 2148 true A01: 5733557-5735704 Brassica rapa FPsc
Brara.A01083 0.5kb upstream 0.5kb upstream 500 false A01: 5735205-5735704 Brassica rapa FPsc
Brara.A01083 0.5kb downstream 0.5kb downstream 2148 true A01: 5733057-5735204 Brassica rapa FPsc
Brara.A01083 0.5kb downstream 0.5kb downstream 500 false A01: 5733057-5733556 Brassica rapa FPsc
Brara.A01083 1.0kb upstream 1.0kb upstream 2648 true A01: 5733557-5736204 Brassica rapa FPsc
Brara.A01083 1.0kb upstream 1.0kb upstream 1000 false A01: 5735205-5736204 Brassica rapa FPsc
Brara.A01083 1.0kb downstream 1.0kb downstream 2648 true A01: 5732557-5735204 Brassica rapa FPsc
Brara.A01083 1.0kb downstream 1.0kb downstream 1000 false A01: 5732557-5733556 Brassica rapa FPsc
Brara.A01083 2.0kb upstream 2.0kb upstream 3648 true A01: 5733557-5737204 Brassica rapa FPsc
Brara.A01083 2.0kb upstream 2.0kb upstream 2000 false A01: 5735205-5737204 Brassica rapa FPsc
Brara.A01083 2.0kb downstream 2.0kb downstream 3648 true A01: 5731557-5735204 Brassica rapa FPsc
Brara.A01083 2.0kb downstream 2.0kb downstream 2000 false A01: 5731557-5733556 Brassica rapa FPsc
Brara.A01083 5.0kb upstream 5.0kb upstream 6648 true A01: 5733557-5740204 Brassica rapa FPsc
Brara.A01083 5.0kb upstream 5.0kb upstream 5000 false A01: 5735205-5740204 Brassica rapa FPsc
Brara.A01083 5.0kb downstream 5.0kb downstream 6648 true A01: 5728557-5735204 Brassica rapa FPsc
Brara.A01083 5.0kb downstream 5.0kb downstream 5000 false A01: 5728557-5733556 Brassica rapa FPsc
Brara.A01083 10.0kb upstream 10.0kb upstream 11648 true A01: 5733557-5745204 Brassica rapa FPsc
Brara.A01083 10.0kb upstream 10.0kb upstream 10000 false A01: 5735205-5745204 Brassica rapa FPsc
Brara.A01083 10.0kb downstream 10.0kb downstream 11648 true A01: 5723557-5735204 Brassica rapa FPsc
Brara.A01083 10.0kb downstream 10.0kb downstream 10000 false A01: 5723557-5733556 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372897 5261 Brassicaceae View MSA
123830165 5264 Brassicales-Malvales View MSA
124344760 5266 SBM View MSA
124242306 5268 Malvidae View MSA
124063813 5270 Rosid View MSA
123749165 5271 Pentapetalae View MSA
122794919 5272 Eudicot View MSA
122047532 5273 Angiosperm View MSA
123428893 5275 Viridiplantae View MSA
121347611 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier