Gene : Brara.A01077 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR22952:SF210 - DOG1 ALPHA SPLICE VARIANT Genomic Order:  1077
Name:  ? Brara.A01077 Secondary Identifier:  ? PAC:30639431
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A01077 0.5kb upstream 0.5kb upstream 11586 true A01: 5681448-5693033 Brassica rapa FPsc
Brara.A01077 0.5kb upstream 0.5kb upstream 500 false A01: 5681448-5681947 Brassica rapa FPsc
Brara.A01077 0.5kb downstream 0.5kb downstream 11586 true A01: 5681948-5693533 Brassica rapa FPsc
Brara.A01077 0.5kb downstream 0.5kb downstream 500 false A01: 5693034-5693533 Brassica rapa FPsc
Brara.A01077 1.0kb upstream 1.0kb upstream 12086 true A01: 5680948-5693033 Brassica rapa FPsc
Brara.A01077 1.0kb upstream 1.0kb upstream 1000 false A01: 5680948-5681947 Brassica rapa FPsc
Brara.A01077 1.0kb downstream 1.0kb downstream 12086 true A01: 5681948-5694033 Brassica rapa FPsc
Brara.A01077 1.0kb downstream 1.0kb downstream 1000 false A01: 5693034-5694033 Brassica rapa FPsc
Brara.A01077 2.0kb upstream 2.0kb upstream 13086 true A01: 5679948-5693033 Brassica rapa FPsc
Brara.A01077 2.0kb upstream 2.0kb upstream 2000 false A01: 5679948-5681947 Brassica rapa FPsc
Brara.A01077 2.0kb downstream 2.0kb downstream 13086 true A01: 5681948-5695033 Brassica rapa FPsc
Brara.A01077 2.0kb downstream 2.0kb downstream 2000 false A01: 5693034-5695033 Brassica rapa FPsc
Brara.A01077 5.0kb upstream 5.0kb upstream 16086 true A01: 5676948-5693033 Brassica rapa FPsc
Brara.A01077 5.0kb upstream 5.0kb upstream 5000 false A01: 5676948-5681947 Brassica rapa FPsc
Brara.A01077 5.0kb downstream 5.0kb downstream 16086 true A01: 5681948-5698033 Brassica rapa FPsc
Brara.A01077 5.0kb downstream 5.0kb downstream 5000 false A01: 5693034-5698033 Brassica rapa FPsc
Brara.A01077 10.0kb upstream 10.0kb upstream 21086 true A01: 5671948-5693033 Brassica rapa FPsc
Brara.A01077 10.0kb upstream 10.0kb upstream 10000 false A01: 5671948-5681947 Brassica rapa FPsc
Brara.A01077 10.0kb downstream 10.0kb downstream 21086 true A01: 5681948-5703033 Brassica rapa FPsc
Brara.A01077 10.0kb downstream 10.0kb downstream 10000 false A01: 5693034-5703033 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380472 5261 Brassicaceae View MSA
123802735 5264 Brassicales-Malvales View MSA
124299903 5266 SBM View MSA
124250601 5268 Malvidae View MSA
124070916 5270 Rosid View MSA
123746178 5271 Pentapetalae View MSA
122797836 5272 Eudicot View MSA
122044806 5273 Angiosperm View MSA
121350176 5274 Embryophyte View MSA
123381607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier