Gene : Brara.F01580 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR33734:SF3 - LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 Genomic Order:  1580
Name:  ? Brara.F01580 Secondary Identifier:  ? PAC:30629020
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F01580 0.5kb upstream 0.5kb upstream 2564 true A06: 9390196-9392759 Brassica rapa FPsc
Brara.F01580 0.5kb upstream 0.5kb upstream 500 false A06: 9392260-9392759 Brassica rapa FPsc
Brara.F01580 0.5kb downstream 0.5kb downstream 2564 true A06: 9389696-9392259 Brassica rapa FPsc
Brara.F01580 0.5kb downstream 0.5kb downstream 500 false A06: 9389696-9390195 Brassica rapa FPsc
Brara.F01580 1.0kb upstream 1.0kb upstream 3064 true A06: 9390196-9393259 Brassica rapa FPsc
Brara.F01580 1.0kb upstream 1.0kb upstream 1000 false A06: 9392260-9393259 Brassica rapa FPsc
Brara.F01580 1.0kb downstream 1.0kb downstream 3064 true A06: 9389196-9392259 Brassica rapa FPsc
Brara.F01580 1.0kb downstream 1.0kb downstream 1000 false A06: 9389196-9390195 Brassica rapa FPsc
Brara.F01580 2.0kb upstream 2.0kb upstream 4064 true A06: 9390196-9394259 Brassica rapa FPsc
Brara.F01580 2.0kb upstream 2.0kb upstream 2000 false A06: 9392260-9394259 Brassica rapa FPsc
Brara.F01580 2.0kb downstream 2.0kb downstream 4064 true A06: 9388196-9392259 Brassica rapa FPsc
Brara.F01580 2.0kb downstream 2.0kb downstream 2000 false A06: 9388196-9390195 Brassica rapa FPsc
Brara.F01580 5.0kb upstream 5.0kb upstream 7064 true A06: 9390196-9397259 Brassica rapa FPsc
Brara.F01580 5.0kb upstream 5.0kb upstream 5000 false A06: 9392260-9397259 Brassica rapa FPsc
Brara.F01580 5.0kb downstream 5.0kb downstream 7064 true A06: 9385196-9392259 Brassica rapa FPsc
Brara.F01580 5.0kb downstream 5.0kb downstream 5000 false A06: 9385196-9390195 Brassica rapa FPsc
Brara.F01580 10.0kb upstream 10.0kb upstream 12064 true A06: 9390196-9402259 Brassica rapa FPsc
Brara.F01580 10.0kb upstream 10.0kb upstream 10000 false A06: 9392260-9402259 Brassica rapa FPsc
Brara.F01580 10.0kb downstream 10.0kb downstream 12064 true A06: 9380196-9392259 Brassica rapa FPsc
Brara.F01580 10.0kb downstream 10.0kb downstream 10000 false A06: 9380196-9390195 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361690 5261 Brassicaceae View MSA
123839538 5264 Brassicales-Malvales View MSA
124337865 5266 SBM View MSA
124243393 5268 Malvidae View MSA
124060398 5270 Rosid View MSA
123740598 5271 Pentapetalae View MSA
122791111 5272 Eudicot View MSA
122046889 5273 Angiosperm View MSA
121350976 5274 Embryophyte View MSA
123381953 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier