Gene : Brara.A01172 B. rapa FPsc v1.3
Defline:  (1 of 6) PF00954//PF01453//PF07714//PF08276//PF11883//PF12398 - S-locus glycoprotein domain (S_locus_glycop) // D-mannose binding lectin (B_lectin) // Protein tyrosine kinase (Pkinase_Tyr) // PAN-like domain (PAN_2) // Domain of unknown function (DUF3403) (DUF3403) // Receptor serine/threonine kinase (DUF3660) Genomic Order:  1172
Name:  ? Brara.A01172 Secondary Identifier:  ? PAC:30640421
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A01172 0.5kb upstream 0.5kb upstream 4477 true A01: 6220661-6225137 Brassica rapa FPsc
Brara.A01172 0.5kb upstream 0.5kb upstream 500 false A01: 6224638-6225137 Brassica rapa FPsc
Brara.A01172 0.5kb downstream 0.5kb downstream 4477 true A01: 6220161-6224637 Brassica rapa FPsc
Brara.A01172 0.5kb downstream 0.5kb downstream 500 false A01: 6220161-6220660 Brassica rapa FPsc
Brara.A01172 1.0kb upstream 1.0kb upstream 4977 true A01: 6220661-6225637 Brassica rapa FPsc
Brara.A01172 1.0kb upstream 1.0kb upstream 1000 false A01: 6224638-6225637 Brassica rapa FPsc
Brara.A01172 1.0kb downstream 1.0kb downstream 4977 true A01: 6219661-6224637 Brassica rapa FPsc
Brara.A01172 1.0kb downstream 1.0kb downstream 1000 false A01: 6219661-6220660 Brassica rapa FPsc
Brara.A01172 2.0kb upstream 2.0kb upstream 5977 true A01: 6220661-6226637 Brassica rapa FPsc
Brara.A01172 2.0kb upstream 2.0kb upstream 2000 false A01: 6224638-6226637 Brassica rapa FPsc
Brara.A01172 2.0kb downstream 2.0kb downstream 5977 true A01: 6218661-6224637 Brassica rapa FPsc
Brara.A01172 2.0kb downstream 2.0kb downstream 2000 false A01: 6218661-6220660 Brassica rapa FPsc
Brara.A01172 5.0kb upstream 5.0kb upstream 8977 true A01: 6220661-6229637 Brassica rapa FPsc
Brara.A01172 5.0kb upstream 5.0kb upstream 5000 false A01: 6224638-6229637 Brassica rapa FPsc
Brara.A01172 5.0kb downstream 5.0kb downstream 8977 true A01: 6215661-6224637 Brassica rapa FPsc
Brara.A01172 5.0kb downstream 5.0kb downstream 5000 false A01: 6215661-6220660 Brassica rapa FPsc
Brara.A01172 10.0kb upstream 10.0kb upstream 13977 true A01: 6220661-6234637 Brassica rapa FPsc
Brara.A01172 10.0kb upstream 10.0kb upstream 10000 false A01: 6224638-6234637 Brassica rapa FPsc
Brara.A01172 10.0kb downstream 10.0kb downstream 13977 true A01: 6210661-6224637 Brassica rapa FPsc
Brara.A01172 10.0kb downstream 10.0kb downstream 10000 false A01: 6210661-6220660 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376690 5261 Brassicaceae View MSA
123831920 5264 Brassicales-Malvales View MSA
124337022 5266 SBM View MSA
124244899 5268 Malvidae View MSA
124060833 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

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