Gene : Brara.A01171 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR23315:SF112 - U-BOX DOMAIN-CONTAINING PROTEIN 8 Genomic Order:  1171
Name:  ? Brara.A01171 Secondary Identifier:  ? PAC:30636399
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A01171 0.5kb upstream 0.5kb upstream 2077 true A01: 6218232-6220308 Brassica rapa FPsc
Brara.A01171 0.5kb upstream 0.5kb upstream 500 false A01: 6219809-6220308 Brassica rapa FPsc
Brara.A01171 0.5kb downstream 0.5kb downstream 2077 true A01: 6217732-6219808 Brassica rapa FPsc
Brara.A01171 0.5kb downstream 0.5kb downstream 500 false A01: 6217732-6218231 Brassica rapa FPsc
Brara.A01171 1.0kb upstream 1.0kb upstream 2577 true A01: 6218232-6220808 Brassica rapa FPsc
Brara.A01171 1.0kb upstream 1.0kb upstream 1000 false A01: 6219809-6220808 Brassica rapa FPsc
Brara.A01171 1.0kb downstream 1.0kb downstream 2577 true A01: 6217232-6219808 Brassica rapa FPsc
Brara.A01171 1.0kb downstream 1.0kb downstream 1000 false A01: 6217232-6218231 Brassica rapa FPsc
Brara.A01171 2.0kb upstream 2.0kb upstream 3577 true A01: 6218232-6221808 Brassica rapa FPsc
Brara.A01171 2.0kb upstream 2.0kb upstream 2000 false A01: 6219809-6221808 Brassica rapa FPsc
Brara.A01171 2.0kb downstream 2.0kb downstream 3577 true A01: 6216232-6219808 Brassica rapa FPsc
Brara.A01171 2.0kb downstream 2.0kb downstream 2000 false A01: 6216232-6218231 Brassica rapa FPsc
Brara.A01171 5.0kb upstream 5.0kb upstream 6577 true A01: 6218232-6224808 Brassica rapa FPsc
Brara.A01171 5.0kb upstream 5.0kb upstream 5000 false A01: 6219809-6224808 Brassica rapa FPsc
Brara.A01171 5.0kb downstream 5.0kb downstream 6577 true A01: 6213232-6219808 Brassica rapa FPsc
Brara.A01171 5.0kb downstream 5.0kb downstream 5000 false A01: 6213232-6218231 Brassica rapa FPsc
Brara.A01171 10.0kb upstream 10.0kb upstream 11577 true A01: 6218232-6229808 Brassica rapa FPsc
Brara.A01171 10.0kb upstream 10.0kb upstream 10000 false A01: 6219809-6229808 Brassica rapa FPsc
Brara.A01171 10.0kb downstream 10.0kb downstream 11577 true A01: 6208232-6219808 Brassica rapa FPsc
Brara.A01171 10.0kb downstream 10.0kb downstream 10000 false A01: 6208232-6218231 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367766 5261 Brassicaceae View MSA
123830469 5264 Brassicales-Malvales View MSA
124339779 5266 SBM View MSA
124237455 5268 Malvidae View MSA
124067004 5270 Rosid View MSA
123739822 5271 Pentapetalae View MSA
122791659 5272 Eudicot View MSA
122041968 5273 Angiosperm View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier