Gene : Brara.A01166 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR33399:SF3 - OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC-RELATED Genomic Order:  1166
Name:  ? Brara.A01166 Secondary Identifier:  ? PAC:30637096
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A01166 0.5kb upstream 0.5kb upstream 1556 true A01: 6201564-6203119 Brassica rapa FPsc
Brara.A01166 0.5kb upstream 0.5kb upstream 500 false A01: 6201564-6202063 Brassica rapa FPsc
Brara.A01166 0.5kb downstream 0.5kb downstream 1556 true A01: 6202064-6203619 Brassica rapa FPsc
Brara.A01166 0.5kb downstream 0.5kb downstream 500 false A01: 6203120-6203619 Brassica rapa FPsc
Brara.A01166 1.0kb upstream 1.0kb upstream 2056 true A01: 6201064-6203119 Brassica rapa FPsc
Brara.A01166 1.0kb upstream 1.0kb upstream 1000 false A01: 6201064-6202063 Brassica rapa FPsc
Brara.A01166 1.0kb downstream 1.0kb downstream 2056 true A01: 6202064-6204119 Brassica rapa FPsc
Brara.A01166 1.0kb downstream 1.0kb downstream 1000 false A01: 6203120-6204119 Brassica rapa FPsc
Brara.A01166 2.0kb upstream 2.0kb upstream 3056 true A01: 6200064-6203119 Brassica rapa FPsc
Brara.A01166 2.0kb upstream 2.0kb upstream 2000 false A01: 6200064-6202063 Brassica rapa FPsc
Brara.A01166 2.0kb downstream 2.0kb downstream 3056 true A01: 6202064-6205119 Brassica rapa FPsc
Brara.A01166 2.0kb downstream 2.0kb downstream 2000 false A01: 6203120-6205119 Brassica rapa FPsc
Brara.A01166 5.0kb upstream 5.0kb upstream 6056 true A01: 6197064-6203119 Brassica rapa FPsc
Brara.A01166 5.0kb upstream 5.0kb upstream 5000 false A01: 6197064-6202063 Brassica rapa FPsc
Brara.A01166 5.0kb downstream 5.0kb downstream 6056 true A01: 6202064-6208119 Brassica rapa FPsc
Brara.A01166 5.0kb downstream 5.0kb downstream 5000 false A01: 6203120-6208119 Brassica rapa FPsc
Brara.A01166 10.0kb upstream 10.0kb upstream 11056 true A01: 6192064-6203119 Brassica rapa FPsc
Brara.A01166 10.0kb upstream 10.0kb upstream 10000 false A01: 6192064-6202063 Brassica rapa FPsc
Brara.A01166 10.0kb downstream 10.0kb downstream 11056 true A01: 6202064-6213119 Brassica rapa FPsc
Brara.A01166 10.0kb downstream 10.0kb downstream 10000 false A01: 6203120-6213119 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364990 5261 Brassicaceae View MSA
123838600 5264 Brassicales-Malvales View MSA
124342527 5266 SBM View MSA
124238022 5268 Malvidae View MSA
124068035 5270 Rosid View MSA
123737093 5271 Pentapetalae View MSA
122790173 5272 Eudicot View MSA
122043772 5273 Angiosperm View MSA
121344186 5274 Embryophyte View MSA
123427004 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier