Gene : Brara.F01396 B. rapa FPsc v1.3
Defline:  (1 of 2) 2.4.1.132 - GDP-Man:Man(1)GlcNAc(2)-PP-dolichol alpha-1,3-mannosyltransferase / Mannosyltransferase II Genomic Order:  1396
Name:  ? Brara.F01396 Secondary Identifier:  ? PAC:30627890
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F01396 0.5kb upstream 0.5kb upstream 2891 true A06: 7937616-7940506 Brassica rapa FPsc
Brara.F01396 0.5kb upstream 0.5kb upstream 500 false A06: 7937616-7938115 Brassica rapa FPsc
Brara.F01396 0.5kb downstream 0.5kb downstream 2891 true A06: 7938116-7941006 Brassica rapa FPsc
Brara.F01396 0.5kb downstream 0.5kb downstream 500 false A06: 7940507-7941006 Brassica rapa FPsc
Brara.F01396 1.0kb upstream 1.0kb upstream 3391 true A06: 7937116-7940506 Brassica rapa FPsc
Brara.F01396 1.0kb upstream 1.0kb upstream 1000 false A06: 7937116-7938115 Brassica rapa FPsc
Brara.F01396 1.0kb downstream 1.0kb downstream 3391 true A06: 7938116-7941506 Brassica rapa FPsc
Brara.F01396 1.0kb downstream 1.0kb downstream 1000 false A06: 7940507-7941506 Brassica rapa FPsc
Brara.F01396 2.0kb upstream 2.0kb upstream 4391 true A06: 7936116-7940506 Brassica rapa FPsc
Brara.F01396 2.0kb upstream 2.0kb upstream 2000 false A06: 7936116-7938115 Brassica rapa FPsc
Brara.F01396 2.0kb downstream 2.0kb downstream 4391 true A06: 7938116-7942506 Brassica rapa FPsc
Brara.F01396 2.0kb downstream 2.0kb downstream 2000 false A06: 7940507-7942506 Brassica rapa FPsc
Brara.F01396 5.0kb upstream 5.0kb upstream 7391 true A06: 7933116-7940506 Brassica rapa FPsc
Brara.F01396 5.0kb upstream 5.0kb upstream 5000 false A06: 7933116-7938115 Brassica rapa FPsc
Brara.F01396 5.0kb downstream 5.0kb downstream 7391 true A06: 7938116-7945506 Brassica rapa FPsc
Brara.F01396 5.0kb downstream 5.0kb downstream 5000 false A06: 7940507-7945506 Brassica rapa FPsc
Brara.F01396 10.0kb upstream 10.0kb upstream 12391 true A06: 7928116-7940506 Brassica rapa FPsc
Brara.F01396 10.0kb upstream 10.0kb upstream 10000 false A06: 7928116-7938115 Brassica rapa FPsc
Brara.F01396 10.0kb downstream 10.0kb downstream 12391 true A06: 7938116-7950506 Brassica rapa FPsc
Brara.F01396 10.0kb downstream 10.0kb downstream 10000 false A06: 7940507-7950506 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043473 5273 Angiosperm View MSA
122361863 5261 Brassicaceae View MSA
123836031 5264 Brassicales-Malvales View MSA
124338930 5266 SBM View MSA
124253231 5268 Malvidae View MSA
124065607 5270 Rosid View MSA
123746815 5271 Pentapetalae View MSA
122786445 5272 Eudicot View MSA
121310134 5274 Embryophyte View MSA
123347706 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier