Gene : Brara.F01393 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR33428:SF2 - CHLOROPHYLLASE-1 Genomic Order:  1393
Name:  ? Brara.F01393 Secondary Identifier:  ? PAC:30627891
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5098 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6927 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F01393 0.5kb upstream 0.5kb upstream 2040 true A06: 7929155-7931194 Brassica rapa FPsc
Brara.F01393 0.5kb upstream 0.5kb upstream 500 false A06: 7930695-7931194 Brassica rapa FPsc
Brara.F01393 0.5kb downstream 0.5kb downstream 2040 true A06: 7928655-7930694 Brassica rapa FPsc
Brara.F01393 0.5kb downstream 0.5kb downstream 500 false A06: 7928655-7929154 Brassica rapa FPsc
Brara.F01393 1.0kb upstream 1.0kb upstream 2540 true A06: 7929155-7931694 Brassica rapa FPsc
Brara.F01393 1.0kb upstream 1.0kb upstream 1000 false A06: 7930695-7931694 Brassica rapa FPsc
Brara.F01393 1.0kb downstream 1.0kb downstream 2540 true A06: 7928155-7930694 Brassica rapa FPsc
Brara.F01393 1.0kb downstream 1.0kb downstream 1000 false A06: 7928155-7929154 Brassica rapa FPsc
Brara.F01393 2.0kb upstream 2.0kb upstream 3540 true A06: 7929155-7932694 Brassica rapa FPsc
Brara.F01393 2.0kb upstream 2.0kb upstream 2000 false A06: 7930695-7932694 Brassica rapa FPsc
Brara.F01393 2.0kb downstream 2.0kb downstream 3540 true A06: 7927155-7930694 Brassica rapa FPsc
Brara.F01393 2.0kb downstream 2.0kb downstream 2000 false A06: 7927155-7929154 Brassica rapa FPsc
Brara.F01393 5.0kb upstream 5.0kb upstream 6540 true A06: 7929155-7935694 Brassica rapa FPsc
Brara.F01393 5.0kb upstream 5.0kb upstream 5000 false A06: 7930695-7935694 Brassica rapa FPsc
Brara.F01393 5.0kb downstream 5.0kb downstream 6540 true A06: 7924155-7930694 Brassica rapa FPsc
Brara.F01393 5.0kb downstream 5.0kb downstream 5000 false A06: 7924155-7929154 Brassica rapa FPsc
Brara.F01393 10.0kb upstream 10.0kb upstream 11540 true A06: 7929155-7940694 Brassica rapa FPsc
Brara.F01393 10.0kb upstream 10.0kb upstream 10000 false A06: 7930695-7940694 Brassica rapa FPsc
Brara.F01393 10.0kb downstream 10.0kb downstream 11540 true A06: 7919155-7930694 Brassica rapa FPsc
Brara.F01393 10.0kb downstream 10.0kb downstream 10000 false A06: 7919155-7929154 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026648 5273 Angiosperm View MSA
122361862 5261 Brassicaceae View MSA
123798261 5264 Brassicales-Malvales View MSA
124339978 5266 SBM View MSA
124247394 5268 Malvidae View MSA
124064718 5270 Rosid View MSA
123753508 5271 Pentapetalae View MSA
122795782 5272 Eudicot View MSA
121296450 5274 Embryophyte View MSA
123428003 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier