Gene : Brara.D00441 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR23315:SF119 - U-BOX DOMAIN-CONTAINING PROTEIN 3 Genomic Order:  441
Name:  ? Brara.D00441 Secondary Identifier:  ? PAC:30621912
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D00441 0.5kb upstream 0.5kb upstream 4186 true A04: 3250065-3254250 Brassica rapa FPsc
Brara.D00441 0.5kb upstream 0.5kb upstream 500 false A04: 3250065-3250564 Brassica rapa FPsc
Brara.D00441 0.5kb downstream 0.5kb downstream 4186 true A04: 3250565-3254750 Brassica rapa FPsc
Brara.D00441 0.5kb downstream 0.5kb downstream 500 false A04: 3254251-3254750 Brassica rapa FPsc
Brara.D00441 1.0kb upstream 1.0kb upstream 4686 true A04: 3249565-3254250 Brassica rapa FPsc
Brara.D00441 1.0kb upstream 1.0kb upstream 1000 false A04: 3249565-3250564 Brassica rapa FPsc
Brara.D00441 1.0kb downstream 1.0kb downstream 4686 true A04: 3250565-3255250 Brassica rapa FPsc
Brara.D00441 1.0kb downstream 1.0kb downstream 1000 false A04: 3254251-3255250 Brassica rapa FPsc
Brara.D00441 2.0kb upstream 2.0kb upstream 5686 true A04: 3248565-3254250 Brassica rapa FPsc
Brara.D00441 2.0kb upstream 2.0kb upstream 2000 false A04: 3248565-3250564 Brassica rapa FPsc
Brara.D00441 2.0kb downstream 2.0kb downstream 5686 true A04: 3250565-3256250 Brassica rapa FPsc
Brara.D00441 2.0kb downstream 2.0kb downstream 2000 false A04: 3254251-3256250 Brassica rapa FPsc
Brara.D00441 5.0kb upstream 5.0kb upstream 8686 true A04: 3245565-3254250 Brassica rapa FPsc
Brara.D00441 5.0kb upstream 5.0kb upstream 5000 false A04: 3245565-3250564 Brassica rapa FPsc
Brara.D00441 5.0kb downstream 5.0kb downstream 8686 true A04: 3250565-3259250 Brassica rapa FPsc
Brara.D00441 5.0kb downstream 5.0kb downstream 5000 false A04: 3254251-3259250 Brassica rapa FPsc
Brara.D00441 10.0kb upstream 10.0kb upstream 13686 true A04: 3240565-3254250 Brassica rapa FPsc
Brara.D00441 10.0kb upstream 10.0kb upstream 10000 false A04: 3240565-3250564 Brassica rapa FPsc
Brara.D00441 10.0kb downstream 10.0kb downstream 13686 true A04: 3250565-3264250 Brassica rapa FPsc
Brara.D00441 10.0kb downstream 10.0kb downstream 10000 false A04: 3254251-3264250 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372135 5261 Brassicaceae View MSA
123829079 5264 Brassicales-Malvales View MSA
124344336 5266 SBM View MSA
124243678 5268 Malvidae View MSA
124067773 5270 Rosid View MSA
123748124 5271 Pentapetalae View MSA
122789337 5272 Eudicot View MSA
122048814 5273 Angiosperm View MSA
121345933 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier