Gene : Brara.A01008 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR13149 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS25 Genomic Order:  1008
Name:  ? Brara.A01008 Secondary Identifier:  ? PAC:30638985
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A01008 0.5kb upstream 0.5kb upstream 1739 true A01: 5286013-5287751 Brassica rapa FPsc
Brara.A01008 0.5kb upstream 0.5kb upstream 500 false A01: 5287252-5287751 Brassica rapa FPsc
Brara.A01008 0.5kb downstream 0.5kb downstream 1739 true A01: 5285513-5287251 Brassica rapa FPsc
Brara.A01008 0.5kb downstream 0.5kb downstream 500 false A01: 5285513-5286012 Brassica rapa FPsc
Brara.A01008 1.0kb upstream 1.0kb upstream 2239 true A01: 5286013-5288251 Brassica rapa FPsc
Brara.A01008 1.0kb upstream 1.0kb upstream 1000 false A01: 5287252-5288251 Brassica rapa FPsc
Brara.A01008 1.0kb downstream 1.0kb downstream 2239 true A01: 5285013-5287251 Brassica rapa FPsc
Brara.A01008 1.0kb downstream 1.0kb downstream 1000 false A01: 5285013-5286012 Brassica rapa FPsc
Brara.A01008 2.0kb upstream 2.0kb upstream 3239 true A01: 5286013-5289251 Brassica rapa FPsc
Brara.A01008 2.0kb upstream 2.0kb upstream 2000 false A01: 5287252-5289251 Brassica rapa FPsc
Brara.A01008 2.0kb downstream 2.0kb downstream 3239 true A01: 5284013-5287251 Brassica rapa FPsc
Brara.A01008 2.0kb downstream 2.0kb downstream 2000 false A01: 5284013-5286012 Brassica rapa FPsc
Brara.A01008 5.0kb upstream 5.0kb upstream 6239 true A01: 5286013-5292251 Brassica rapa FPsc
Brara.A01008 5.0kb upstream 5.0kb upstream 5000 false A01: 5287252-5292251 Brassica rapa FPsc
Brara.A01008 5.0kb downstream 5.0kb downstream 6239 true A01: 5281013-5287251 Brassica rapa FPsc
Brara.A01008 5.0kb downstream 5.0kb downstream 5000 false A01: 5281013-5286012 Brassica rapa FPsc
Brara.A01008 10.0kb upstream 10.0kb upstream 11239 true A01: 5286013-5297251 Brassica rapa FPsc
Brara.A01008 10.0kb upstream 10.0kb upstream 10000 false A01: 5287252-5297251 Brassica rapa FPsc
Brara.A01008 10.0kb downstream 10.0kb downstream 11239 true A01: 5276013-5287251 Brassica rapa FPsc
Brara.A01008 10.0kb downstream 10.0kb downstream 10000 false A01: 5276013-5286012 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369376 5261 Brassicaceae View MSA
123833632 5264 Brassicales-Malvales View MSA
124342864 5266 SBM View MSA
124253535 5268 Malvidae View MSA
124065529 5270 Rosid View MSA
123740104 5271 Pentapetalae View MSA
122789315 5272 Eudicot View MSA
122043076 5273 Angiosperm View MSA
121347128 5274 Embryophyte View MSA
123424055 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier