Gene : Brara.F01317 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR11945:SF156 - MADS-BOX PROTEIN-RELATED Genomic Order:  1317
Name:  ? Brara.F01317 Secondary Identifier:  ? PAC:30628160
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F01317 0.5kb upstream 0.5kb upstream 2764 true A06: 7381145-7383908 Brassica rapa FPsc
Brara.F01317 0.5kb upstream 0.5kb upstream 500 false A06: 7383409-7383908 Brassica rapa FPsc
Brara.F01317 0.5kb downstream 0.5kb downstream 2764 true A06: 7380645-7383408 Brassica rapa FPsc
Brara.F01317 0.5kb downstream 0.5kb downstream 500 false A06: 7380645-7381144 Brassica rapa FPsc
Brara.F01317 1.0kb upstream 1.0kb upstream 3264 true A06: 7381145-7384408 Brassica rapa FPsc
Brara.F01317 1.0kb upstream 1.0kb upstream 1000 false A06: 7383409-7384408 Brassica rapa FPsc
Brara.F01317 1.0kb downstream 1.0kb downstream 3264 true A06: 7380145-7383408 Brassica rapa FPsc
Brara.F01317 1.0kb downstream 1.0kb downstream 1000 false A06: 7380145-7381144 Brassica rapa FPsc
Brara.F01317 2.0kb upstream 2.0kb upstream 4264 true A06: 7381145-7385408 Brassica rapa FPsc
Brara.F01317 2.0kb upstream 2.0kb upstream 2000 false A06: 7383409-7385408 Brassica rapa FPsc
Brara.F01317 2.0kb downstream 2.0kb downstream 4264 true A06: 7379145-7383408 Brassica rapa FPsc
Brara.F01317 2.0kb downstream 2.0kb downstream 2000 false A06: 7379145-7381144 Brassica rapa FPsc
Brara.F01317 5.0kb upstream 5.0kb upstream 7264 true A06: 7381145-7388408 Brassica rapa FPsc
Brara.F01317 5.0kb upstream 5.0kb upstream 5000 false A06: 7383409-7388408 Brassica rapa FPsc
Brara.F01317 5.0kb downstream 5.0kb downstream 7264 true A06: 7376145-7383408 Brassica rapa FPsc
Brara.F01317 5.0kb downstream 5.0kb downstream 5000 false A06: 7376145-7381144 Brassica rapa FPsc
Brara.F01317 10.0kb upstream 10.0kb upstream 12264 true A06: 7381145-7393408 Brassica rapa FPsc
Brara.F01317 10.0kb upstream 10.0kb upstream 10000 false A06: 7383409-7393408 Brassica rapa FPsc
Brara.F01317 10.0kb downstream 10.0kb downstream 12264 true A06: 7371145-7383408 Brassica rapa FPsc
Brara.F01317 10.0kb downstream 10.0kb downstream 10000 false A06: 7371145-7381144 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122350220 5261 Brassicaceae Singleton cluster - no MSA
123789286 5264 Brassicales-Malvales Singleton cluster - no MSA
124287289 5266 SBM Singleton cluster - no MSA
124254245 5268 Malvidae View MSA
124074630 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier