Gene : Brara.F01328 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR10000//PTHR10000:SF13 - PHOSPHOSERINE PHOSPHATASE Genomic Order:  1328
Name:  ? Brara.F01328 Secondary Identifier:  ? PAC:30630123
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc SER-GLYSYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc SERSYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F01328 0.5kb upstream 0.5kb upstream 1848 true A06: 7475908-7477755 Brassica rapa FPsc
Brara.F01328 0.5kb upstream 0.5kb upstream 500 false A06: 7475908-7476407 Brassica rapa FPsc
Brara.F01328 0.5kb downstream 0.5kb downstream 1848 true A06: 7476408-7478255 Brassica rapa FPsc
Brara.F01328 0.5kb downstream 0.5kb downstream 500 false A06: 7477756-7478255 Brassica rapa FPsc
Brara.F01328 1.0kb upstream 1.0kb upstream 2348 true A06: 7475408-7477755 Brassica rapa FPsc
Brara.F01328 1.0kb upstream 1.0kb upstream 1000 false A06: 7475408-7476407 Brassica rapa FPsc
Brara.F01328 1.0kb downstream 1.0kb downstream 2348 true A06: 7476408-7478755 Brassica rapa FPsc
Brara.F01328 1.0kb downstream 1.0kb downstream 1000 false A06: 7477756-7478755 Brassica rapa FPsc
Brara.F01328 2.0kb upstream 2.0kb upstream 3348 true A06: 7474408-7477755 Brassica rapa FPsc
Brara.F01328 2.0kb upstream 2.0kb upstream 2000 false A06: 7474408-7476407 Brassica rapa FPsc
Brara.F01328 2.0kb downstream 2.0kb downstream 3348 true A06: 7476408-7479755 Brassica rapa FPsc
Brara.F01328 2.0kb downstream 2.0kb downstream 2000 false A06: 7477756-7479755 Brassica rapa FPsc
Brara.F01328 5.0kb upstream 5.0kb upstream 6348 true A06: 7471408-7477755 Brassica rapa FPsc
Brara.F01328 5.0kb upstream 5.0kb upstream 5000 false A06: 7471408-7476407 Brassica rapa FPsc
Brara.F01328 5.0kb downstream 5.0kb downstream 6348 true A06: 7476408-7482755 Brassica rapa FPsc
Brara.F01328 5.0kb downstream 5.0kb downstream 5000 false A06: 7477756-7482755 Brassica rapa FPsc
Brara.F01328 10.0kb upstream 10.0kb upstream 11348 true A06: 7466408-7477755 Brassica rapa FPsc
Brara.F01328 10.0kb upstream 10.0kb upstream 10000 false A06: 7466408-7476407 Brassica rapa FPsc
Brara.F01328 10.0kb downstream 10.0kb downstream 11348 true A06: 7476408-7487755 Brassica rapa FPsc
Brara.F01328 10.0kb downstream 10.0kb downstream 10000 false A06: 7477756-7487755 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121579785 5273 Angiosperm View MSA
122350635 5261 Brassicaceae Singleton cluster - no MSA
123789632 5264 Brassicales-Malvales Singleton cluster - no MSA
124287625 5266 SBM Singleton cluster - no MSA
124256102 5268 Malvidae View MSA
123953421 5270 Rosid View MSA
123530798 5271 Pentapetalae View MSA
122565738 5272 Eudicot View MSA
120852234 5274 Embryophyte View MSA
123426809 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier