Gene : Brara.F01379 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR15052:SF2 - GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 2 Genomic Order:  1379
Name:  ? Brara.F01379 Secondary Identifier:  ? PAC:30630013
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F01379 0.5kb upstream 0.5kb upstream 5278 true A06: 7855555-7860832 Brassica rapa FPsc
Brara.F01379 0.5kb upstream 0.5kb upstream 500 false A06: 7855555-7856054 Brassica rapa FPsc
Brara.F01379 0.5kb downstream 0.5kb downstream 5278 true A06: 7856055-7861332 Brassica rapa FPsc
Brara.F01379 0.5kb downstream 0.5kb downstream 500 false A06: 7860833-7861332 Brassica rapa FPsc
Brara.F01379 1.0kb upstream 1.0kb upstream 5778 true A06: 7855055-7860832 Brassica rapa FPsc
Brara.F01379 1.0kb upstream 1.0kb upstream 1000 false A06: 7855055-7856054 Brassica rapa FPsc
Brara.F01379 1.0kb downstream 1.0kb downstream 5778 true A06: 7856055-7861832 Brassica rapa FPsc
Brara.F01379 1.0kb downstream 1.0kb downstream 1000 false A06: 7860833-7861832 Brassica rapa FPsc
Brara.F01379 2.0kb upstream 2.0kb upstream 6778 true A06: 7854055-7860832 Brassica rapa FPsc
Brara.F01379 2.0kb upstream 2.0kb upstream 2000 false A06: 7854055-7856054 Brassica rapa FPsc
Brara.F01379 2.0kb downstream 2.0kb downstream 6778 true A06: 7856055-7862832 Brassica rapa FPsc
Brara.F01379 2.0kb downstream 2.0kb downstream 2000 false A06: 7860833-7862832 Brassica rapa FPsc
Brara.F01379 5.0kb upstream 5.0kb upstream 9778 true A06: 7851055-7860832 Brassica rapa FPsc
Brara.F01379 5.0kb upstream 5.0kb upstream 5000 false A06: 7851055-7856054 Brassica rapa FPsc
Brara.F01379 5.0kb downstream 5.0kb downstream 9778 true A06: 7856055-7865832 Brassica rapa FPsc
Brara.F01379 5.0kb downstream 5.0kb downstream 5000 false A06: 7860833-7865832 Brassica rapa FPsc
Brara.F01379 10.0kb upstream 10.0kb upstream 14778 true A06: 7846055-7860832 Brassica rapa FPsc
Brara.F01379 10.0kb upstream 10.0kb upstream 10000 false A06: 7846055-7856054 Brassica rapa FPsc
Brara.F01379 10.0kb downstream 10.0kb downstream 14778 true A06: 7856055-7870832 Brassica rapa FPsc
Brara.F01379 10.0kb downstream 10.0kb downstream 10000 false A06: 7860833-7870832 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026858 5273 Angiosperm View MSA
122350607 5261 Brassicaceae Singleton cluster - no MSA
123789609 5264 Brassicales-Malvales Singleton cluster - no MSA
124287604 5266 SBM Singleton cluster - no MSA
124250917 5268 Malvidae View MSA
124063805 5270 Rosid View MSA
123737128 5271 Pentapetalae View MSA
122794531 5272 Eudicot View MSA
121347438 5274 Embryophyte View MSA
123380552 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier