Gene : Brara.A01028 B. rapa FPsc v1.3
Defline:  (1 of 9) 1.14.13.93 - (+)-abscisic acid 8'-hydroxylase / ABA 8'-hydroxylase Genomic Order:  1028
Name:  ? Brara.A01028 Secondary Identifier:  ? PAC:30639664
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5271 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A01028 0.5kb upstream 0.5kb upstream 3110 true A01: 5393718-5396827 Brassica rapa FPsc
Brara.A01028 0.5kb upstream 0.5kb upstream 500 false A01: 5393718-5394217 Brassica rapa FPsc
Brara.A01028 0.5kb downstream 0.5kb downstream 3110 true A01: 5394218-5397327 Brassica rapa FPsc
Brara.A01028 0.5kb downstream 0.5kb downstream 500 false A01: 5396828-5397327 Brassica rapa FPsc
Brara.A01028 1.0kb upstream 1.0kb upstream 3610 true A01: 5393218-5396827 Brassica rapa FPsc
Brara.A01028 1.0kb upstream 1.0kb upstream 1000 false A01: 5393218-5394217 Brassica rapa FPsc
Brara.A01028 1.0kb downstream 1.0kb downstream 3610 true A01: 5394218-5397827 Brassica rapa FPsc
Brara.A01028 1.0kb downstream 1.0kb downstream 1000 false A01: 5396828-5397827 Brassica rapa FPsc
Brara.A01028 2.0kb upstream 2.0kb upstream 4610 true A01: 5392218-5396827 Brassica rapa FPsc
Brara.A01028 2.0kb upstream 2.0kb upstream 2000 false A01: 5392218-5394217 Brassica rapa FPsc
Brara.A01028 2.0kb downstream 2.0kb downstream 4610 true A01: 5394218-5398827 Brassica rapa FPsc
Brara.A01028 2.0kb downstream 2.0kb downstream 2000 false A01: 5396828-5398827 Brassica rapa FPsc
Brara.A01028 5.0kb upstream 5.0kb upstream 7610 true A01: 5389218-5396827 Brassica rapa FPsc
Brara.A01028 5.0kb upstream 5.0kb upstream 5000 false A01: 5389218-5394217 Brassica rapa FPsc
Brara.A01028 5.0kb downstream 5.0kb downstream 7610 true A01: 5394218-5401827 Brassica rapa FPsc
Brara.A01028 5.0kb downstream 5.0kb downstream 5000 false A01: 5396828-5401827 Brassica rapa FPsc
Brara.A01028 10.0kb upstream 10.0kb upstream 12610 true A01: 5384218-5396827 Brassica rapa FPsc
Brara.A01028 10.0kb upstream 10.0kb upstream 10000 false A01: 5384218-5394217 Brassica rapa FPsc
Brara.A01028 10.0kb downstream 10.0kb downstream 12610 true A01: 5394218-5406827 Brassica rapa FPsc
Brara.A01028 10.0kb downstream 10.0kb downstream 10000 false A01: 5396828-5406827 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122352970 5261 Brassicaceae Singleton cluster - no MSA
123791614 5264 Brassicales-Malvales Singleton cluster - no MSA
124289523 5266 SBM Singleton cluster - no MSA
124251238 5268 Malvidae View MSA
124067549 5270 Rosid View MSA
123747407 5271 Pentapetalae View MSA
122789954 5272 Eudicot View MSA
122044932 5273 Angiosperm View MSA
123429088 5275 Viridiplantae View MSA
121350004 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier