Gene : Brara.F01283 B. rapa FPsc v1.3

Defline:  (1 of 1) PTHR11102:SF84 - HCP-like superfamily protein-related Genomic Order:  1283
Name:  ? Brara.F01283 Secondary Identifier:  ? PAC:30631753

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F01283 0.5kb upstream 0.5kb upstream 3484 true A06: 7159508-7162991 Brassica rapa FPsc
Brara.F01283 0.5kb upstream 0.5kb upstream 500 false A06: 7162492-7162991 Brassica rapa FPsc
Brara.F01283 0.5kb downstream 0.5kb downstream 3484 true A06: 7159008-7162491 Brassica rapa FPsc
Brara.F01283 0.5kb downstream 0.5kb downstream 500 false A06: 7159008-7159507 Brassica rapa FPsc
Brara.F01283 1.0kb upstream 1.0kb upstream 3984 true A06: 7159508-7163491 Brassica rapa FPsc
Brara.F01283 1.0kb upstream 1.0kb upstream 1000 false A06: 7162492-7163491 Brassica rapa FPsc
Brara.F01283 1.0kb downstream 1.0kb downstream 3984 true A06: 7158508-7162491 Brassica rapa FPsc
Brara.F01283 1.0kb downstream 1.0kb downstream 1000 false A06: 7158508-7159507 Brassica rapa FPsc
Brara.F01283 2.0kb upstream 2.0kb upstream 4984 true A06: 7159508-7164491 Brassica rapa FPsc
Brara.F01283 2.0kb upstream 2.0kb upstream 2000 false A06: 7162492-7164491 Brassica rapa FPsc
Brara.F01283 2.0kb downstream 2.0kb downstream 4984 true A06: 7157508-7162491 Brassica rapa FPsc
Brara.F01283 2.0kb downstream 2.0kb downstream 2000 false A06: 7157508-7159507 Brassica rapa FPsc
Brara.F01283 5.0kb upstream 5.0kb upstream 7984 true A06: 7159508-7167491 Brassica rapa FPsc
Brara.F01283 5.0kb upstream 5.0kb upstream 5000 false A06: 7162492-7167491 Brassica rapa FPsc
Brara.F01283 5.0kb downstream 5.0kb downstream 7984 true A06: 7154508-7162491 Brassica rapa FPsc
Brara.F01283 5.0kb downstream 5.0kb downstream 5000 false A06: 7154508-7159507 Brassica rapa FPsc
Brara.F01283 10.0kb upstream 10.0kb upstream 12984 true A06: 7159508-7172491 Brassica rapa FPsc
Brara.F01283 10.0kb upstream 10.0kb upstream 10000 false A06: 7162492-7172491 Brassica rapa FPsc
Brara.F01283 10.0kb downstream 10.0kb downstream 12984 true A06: 7149508-7162491 Brassica rapa FPsc
Brara.F01283 10.0kb downstream 10.0kb downstream 10000 false A06: 7149508-7159507 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366990 5261 Brassicaceae View MSA
123834455 5264 Brassicales-Malvales View MSA
124341121 5266 SBM View MSA
124242147 5268 Malvidae View MSA
124065958 5270 Rosid View MSA
123743984 5271 Pentapetalae View MSA
122786956 5272 Eudicot View MSA
122044163 5273 Angiosperm View MSA
123428907 5275 Viridiplantae View MSA
121346808 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier