Gene : Brara.A00833 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR14155:SF95 - E3 UBIQUITIN-PROTEIN LIGASE ATL42-RELATED Genomic Order:  833
Name:  ? Brara.A00833 Secondary Identifier:  ? PAC:30637690
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A00833 0.5kb upstream 0.5kb upstream 1878 true A01: 4214106-4215983 Brassica rapa FPsc
Brara.A00833 0.5kb upstream 0.5kb upstream 500 false A01: 4214106-4214605 Brassica rapa FPsc
Brara.A00833 0.5kb downstream 0.5kb downstream 1878 true A01: 4214606-4216483 Brassica rapa FPsc
Brara.A00833 0.5kb downstream 0.5kb downstream 500 false A01: 4215984-4216483 Brassica rapa FPsc
Brara.A00833 1.0kb upstream 1.0kb upstream 2378 true A01: 4213606-4215983 Brassica rapa FPsc
Brara.A00833 1.0kb upstream 1.0kb upstream 1000 false A01: 4213606-4214605 Brassica rapa FPsc
Brara.A00833 1.0kb downstream 1.0kb downstream 2378 true A01: 4214606-4216983 Brassica rapa FPsc
Brara.A00833 1.0kb downstream 1.0kb downstream 1000 false A01: 4215984-4216983 Brassica rapa FPsc
Brara.A00833 2.0kb upstream 2.0kb upstream 3378 true A01: 4212606-4215983 Brassica rapa FPsc
Brara.A00833 2.0kb upstream 2.0kb upstream 2000 false A01: 4212606-4214605 Brassica rapa FPsc
Brara.A00833 2.0kb downstream 2.0kb downstream 3378 true A01: 4214606-4217983 Brassica rapa FPsc
Brara.A00833 2.0kb downstream 2.0kb downstream 2000 false A01: 4215984-4217983 Brassica rapa FPsc
Brara.A00833 5.0kb upstream 5.0kb upstream 6378 true A01: 4209606-4215983 Brassica rapa FPsc
Brara.A00833 5.0kb upstream 5.0kb upstream 5000 false A01: 4209606-4214605 Brassica rapa FPsc
Brara.A00833 5.0kb downstream 5.0kb downstream 6378 true A01: 4214606-4220983 Brassica rapa FPsc
Brara.A00833 5.0kb downstream 5.0kb downstream 5000 false A01: 4215984-4220983 Brassica rapa FPsc
Brara.A00833 10.0kb upstream 10.0kb upstream 11378 true A01: 4204606-4215983 Brassica rapa FPsc
Brara.A00833 10.0kb upstream 10.0kb upstream 10000 false A01: 4204606-4214605 Brassica rapa FPsc
Brara.A00833 10.0kb downstream 10.0kb downstream 11378 true A01: 4214606-4225983 Brassica rapa FPsc
Brara.A00833 10.0kb downstream 10.0kb downstream 10000 false A01: 4215984-4225983 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369091 5261 Brassicaceae View MSA
123839327 5264 Brassicales-Malvales View MSA
124337844 5266 SBM View MSA
124251275 5268 Malvidae View MSA
124068292 5270 Rosid View MSA
123750856 5271 Pentapetalae View MSA
122796096 5272 Eudicot View MSA
122047388 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121346576 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier