Gene : Brara.F01116 B. rapa FPsc v1.3
Defline:  (1 of 279) PF00847 - AP2 domain (AP2) Genomic Order:  1116
Name:  ? Brara.F01116 Secondary Identifier:  ? PAC:30629209
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F01116 0.5kb upstream 0.5kb upstream 3310 true A06: 6261965-6265274 Brassica rapa FPsc
Brara.F01116 0.5kb upstream 0.5kb upstream 500 false A06: 6261965-6262464 Brassica rapa FPsc
Brara.F01116 0.5kb downstream 0.5kb downstream 3310 true A06: 6262465-6265774 Brassica rapa FPsc
Brara.F01116 0.5kb downstream 0.5kb downstream 500 false A06: 6265275-6265774 Brassica rapa FPsc
Brara.F01116 1.0kb upstream 1.0kb upstream 3810 true A06: 6261465-6265274 Brassica rapa FPsc
Brara.F01116 1.0kb upstream 1.0kb upstream 1000 false A06: 6261465-6262464 Brassica rapa FPsc
Brara.F01116 1.0kb downstream 1.0kb downstream 3810 true A06: 6262465-6266274 Brassica rapa FPsc
Brara.F01116 1.0kb downstream 1.0kb downstream 1000 false A06: 6265275-6266274 Brassica rapa FPsc
Brara.F01116 2.0kb upstream 2.0kb upstream 4810 true A06: 6260465-6265274 Brassica rapa FPsc
Brara.F01116 2.0kb upstream 2.0kb upstream 2000 false A06: 6260465-6262464 Brassica rapa FPsc
Brara.F01116 2.0kb downstream 2.0kb downstream 4810 true A06: 6262465-6267274 Brassica rapa FPsc
Brara.F01116 2.0kb downstream 2.0kb downstream 2000 false A06: 6265275-6267274 Brassica rapa FPsc
Brara.F01116 5.0kb upstream 5.0kb upstream 7810 true A06: 6257465-6265274 Brassica rapa FPsc
Brara.F01116 5.0kb upstream 5.0kb upstream 5000 false A06: 6257465-6262464 Brassica rapa FPsc
Brara.F01116 5.0kb downstream 5.0kb downstream 7810 true A06: 6262465-6270274 Brassica rapa FPsc
Brara.F01116 5.0kb downstream 5.0kb downstream 5000 false A06: 6265275-6270274 Brassica rapa FPsc
Brara.F01116 10.0kb upstream 10.0kb upstream 12810 true A06: 6252465-6265274 Brassica rapa FPsc
Brara.F01116 10.0kb upstream 10.0kb upstream 10000 false A06: 6252465-6262464 Brassica rapa FPsc
Brara.F01116 10.0kb downstream 10.0kb downstream 12810 true A06: 6262465-6275274 Brassica rapa FPsc
Brara.F01116 10.0kb downstream 10.0kb downstream 10000 false A06: 6265275-6275274 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371444 5261 Brassicaceae View MSA
123838973 5264 Brassicales-Malvales View MSA
124349424 5266 SBM View MSA
124244626 5268 Malvidae View MSA
124061402 5270 Rosid View MSA
123744110 5271 Pentapetalae View MSA
122797615 5272 Eudicot View MSA
122048142 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121350345 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier