Gene : Brara.F02728 B. rapa FPsc v1.3
Defline:  (1 of 6) 2.4.1.14 - Sucrose-phosphate synthase / UDP-glucose-fructose-phosphate glucosyltransferase Genomic Order:  2728
Name:  ? Brara.F02728 Secondary Identifier:  ? PAC:30630284
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7238 Brassica rapa FPsc pathologic  
BrapaFPsc SUCSYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F02728 0.5kb upstream 0.5kb upstream 5464 true A06: 22474721-22480184 Brassica rapa FPsc
Brara.F02728 0.5kb upstream 0.5kb upstream 500 false A06: 22474721-22475220 Brassica rapa FPsc
Brara.F02728 0.5kb downstream 0.5kb downstream 5464 true A06: 22475221-22480684 Brassica rapa FPsc
Brara.F02728 0.5kb downstream 0.5kb downstream 500 false A06: 22480185-22480684 Brassica rapa FPsc
Brara.F02728 1.0kb upstream 1.0kb upstream 5964 true A06: 22474221-22480184 Brassica rapa FPsc
Brara.F02728 1.0kb upstream 1.0kb upstream 1000 false A06: 22474221-22475220 Brassica rapa FPsc
Brara.F02728 1.0kb downstream 1.0kb downstream 5964 true A06: 22475221-22481184 Brassica rapa FPsc
Brara.F02728 1.0kb downstream 1.0kb downstream 1000 false A06: 22480185-22481184 Brassica rapa FPsc
Brara.F02728 2.0kb upstream 2.0kb upstream 6964 true A06: 22473221-22480184 Brassica rapa FPsc
Brara.F02728 2.0kb upstream 2.0kb upstream 2000 false A06: 22473221-22475220 Brassica rapa FPsc
Brara.F02728 2.0kb downstream 2.0kb downstream 6964 true A06: 22475221-22482184 Brassica rapa FPsc
Brara.F02728 2.0kb downstream 2.0kb downstream 2000 false A06: 22480185-22482184 Brassica rapa FPsc
Brara.F02728 5.0kb upstream 5.0kb upstream 9964 true A06: 22470221-22480184 Brassica rapa FPsc
Brara.F02728 5.0kb upstream 5.0kb upstream 5000 false A06: 22470221-22475220 Brassica rapa FPsc
Brara.F02728 5.0kb downstream 5.0kb downstream 9964 true A06: 22475221-22485184 Brassica rapa FPsc
Brara.F02728 5.0kb downstream 5.0kb downstream 5000 false A06: 22480185-22485184 Brassica rapa FPsc
Brara.F02728 10.0kb upstream 10.0kb upstream 14964 true A06: 22465221-22480184 Brassica rapa FPsc
Brara.F02728 10.0kb upstream 10.0kb upstream 10000 false A06: 22465221-22475220 Brassica rapa FPsc
Brara.F02728 10.0kb downstream 10.0kb downstream 14964 true A06: 22475221-22490184 Brassica rapa FPsc
Brara.F02728 10.0kb downstream 10.0kb downstream 10000 false A06: 22480185-22490184 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122350673 5261 Brassicaceae Singleton cluster - no MSA
123839542 5264 Brassicales-Malvales View MSA
124341610 5266 SBM View MSA
124240542 5268 Malvidae View MSA
124062800 5270 Rosid View MSA
123741512 5271 Pentapetalae View MSA
122790617 5272 Eudicot View MSA
122047849 5273 Angiosperm View MSA
121310805 5274 Embryophyte View MSA
123348202 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier