Gene : Brara.F01193 B. rapa FPsc v1.3
Defline:  (1 of 2) 2.5.1.30 - Heptaprenyl diphosphate synthase / Trans-hexaprenyltranstransferase Genomic Order:  1193
Name:  ? Brara.F01193 Secondary Identifier:  ? PAC:30628450
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc HEXPPSYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5120 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5783 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5805 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5807 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5864 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5910 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6520 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F01193 0.5kb upstream 0.5kb upstream 2660 true A06: 6629286-6631945 Brassica rapa FPsc
Brara.F01193 0.5kb upstream 0.5kb upstream 500 false A06: 6629286-6629785 Brassica rapa FPsc
Brara.F01193 0.5kb downstream 0.5kb downstream 2660 true A06: 6629786-6632445 Brassica rapa FPsc
Brara.F01193 0.5kb downstream 0.5kb downstream 500 false A06: 6631946-6632445 Brassica rapa FPsc
Brara.F01193 1.0kb upstream 1.0kb upstream 3160 true A06: 6628786-6631945 Brassica rapa FPsc
Brara.F01193 1.0kb upstream 1.0kb upstream 1000 false A06: 6628786-6629785 Brassica rapa FPsc
Brara.F01193 1.0kb downstream 1.0kb downstream 3160 true A06: 6629786-6632945 Brassica rapa FPsc
Brara.F01193 1.0kb downstream 1.0kb downstream 1000 false A06: 6631946-6632945 Brassica rapa FPsc
Brara.F01193 2.0kb upstream 2.0kb upstream 4160 true A06: 6627786-6631945 Brassica rapa FPsc
Brara.F01193 2.0kb upstream 2.0kb upstream 2000 false A06: 6627786-6629785 Brassica rapa FPsc
Brara.F01193 2.0kb downstream 2.0kb downstream 4160 true A06: 6629786-6633945 Brassica rapa FPsc
Brara.F01193 2.0kb downstream 2.0kb downstream 2000 false A06: 6631946-6633945 Brassica rapa FPsc
Brara.F01193 5.0kb upstream 5.0kb upstream 7160 true A06: 6624786-6631945 Brassica rapa FPsc
Brara.F01193 5.0kb upstream 5.0kb upstream 5000 false A06: 6624786-6629785 Brassica rapa FPsc
Brara.F01193 5.0kb downstream 5.0kb downstream 7160 true A06: 6629786-6636945 Brassica rapa FPsc
Brara.F01193 5.0kb downstream 5.0kb downstream 5000 false A06: 6631946-6636945 Brassica rapa FPsc
Brara.F01193 10.0kb upstream 10.0kb upstream 12160 true A06: 6619786-6631945 Brassica rapa FPsc
Brara.F01193 10.0kb upstream 10.0kb upstream 10000 false A06: 6619786-6629785 Brassica rapa FPsc
Brara.F01193 10.0kb downstream 10.0kb downstream 12160 true A06: 6629786-6641945 Brassica rapa FPsc
Brara.F01193 10.0kb downstream 10.0kb downstream 10000 false A06: 6631946-6641945 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041065 5273 Angiosperm View MSA
122378497 5261 Brassicaceae View MSA
123836843 5264 Brassicales-Malvales View MSA
124340662 5266 SBM View MSA
124241252 5268 Malvidae View MSA
124065347 5270 Rosid View MSA
123746184 5271 Pentapetalae View MSA
122791358 5272 Eudicot View MSA
121345449 5274 Embryophyte View MSA
123424009 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier