Gene : Brara.A01670 B. rapa FPsc v1.3
Defline:  (1 of 2) 2.7.7.22 - Mannose-1-phosphate guanylyltransferase (GDP) / GDP-mannose pyrophosphorylase Genomic Order:  1670
Name:  ? Brara.A01670 Secondary Identifier:  ? PAC:30637377
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-882 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A01670 0.5kb upstream 0.5kb upstream 3051 true A01: 9339687-9342737 Brassica rapa FPsc
Brara.A01670 0.5kb upstream 0.5kb upstream 500 false A01: 9342238-9342737 Brassica rapa FPsc
Brara.A01670 0.5kb downstream 0.5kb downstream 3051 true A01: 9339187-9342237 Brassica rapa FPsc
Brara.A01670 0.5kb downstream 0.5kb downstream 500 false A01: 9339187-9339686 Brassica rapa FPsc
Brara.A01670 1.0kb upstream 1.0kb upstream 3551 true A01: 9339687-9343237 Brassica rapa FPsc
Brara.A01670 1.0kb upstream 1.0kb upstream 1000 false A01: 9342238-9343237 Brassica rapa FPsc
Brara.A01670 1.0kb downstream 1.0kb downstream 3551 true A01: 9338687-9342237 Brassica rapa FPsc
Brara.A01670 1.0kb downstream 1.0kb downstream 1000 false A01: 9338687-9339686 Brassica rapa FPsc
Brara.A01670 2.0kb upstream 2.0kb upstream 4551 true A01: 9339687-9344237 Brassica rapa FPsc
Brara.A01670 2.0kb upstream 2.0kb upstream 2000 false A01: 9342238-9344237 Brassica rapa FPsc
Brara.A01670 2.0kb downstream 2.0kb downstream 4551 true A01: 9337687-9342237 Brassica rapa FPsc
Brara.A01670 2.0kb downstream 2.0kb downstream 2000 false A01: 9337687-9339686 Brassica rapa FPsc
Brara.A01670 5.0kb upstream 5.0kb upstream 7551 true A01: 9339687-9347237 Brassica rapa FPsc
Brara.A01670 5.0kb upstream 5.0kb upstream 5000 false A01: 9342238-9347237 Brassica rapa FPsc
Brara.A01670 5.0kb downstream 5.0kb downstream 7551 true A01: 9334687-9342237 Brassica rapa FPsc
Brara.A01670 5.0kb downstream 5.0kb downstream 5000 false A01: 9334687-9339686 Brassica rapa FPsc
Brara.A01670 10.0kb upstream 10.0kb upstream 12551 true A01: 9339687-9352237 Brassica rapa FPsc
Brara.A01670 10.0kb upstream 10.0kb upstream 10000 false A01: 9342238-9352237 Brassica rapa FPsc
Brara.A01670 10.0kb downstream 10.0kb downstream 12551 true A01: 9329687-9342237 Brassica rapa FPsc
Brara.A01670 10.0kb downstream 10.0kb downstream 10000 false A01: 9329687-9339686 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377404 5261 Brassicaceae View MSA
123835085 5264 Brassicales-Malvales View MSA
124347408 5266 SBM View MSA
124245480 5268 Malvidae View MSA
124071871 5270 Rosid View MSA
123751256 5271 Pentapetalae View MSA
122793442 5272 Eudicot View MSA
122044489 5273 Angiosperm View MSA
121349330 5274 Embryophyte View MSA
123424251 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier