Gene : Brara.A01686 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR13270 - PROTEIN C20ORF116-RELATED Genomic Order:  1686
Name:  ? Brara.A01686 Secondary Identifier:  ? PAC:30637988
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A01686 0.5kb upstream 0.5kb upstream 3161 true A01: 9428272-9431432 Brassica rapa FPsc
Brara.A01686 0.5kb upstream 0.5kb upstream 500 false A01: 9430933-9431432 Brassica rapa FPsc
Brara.A01686 0.5kb downstream 0.5kb downstream 3161 true A01: 9427772-9430932 Brassica rapa FPsc
Brara.A01686 0.5kb downstream 0.5kb downstream 500 false A01: 9427772-9428271 Brassica rapa FPsc
Brara.A01686 1.0kb upstream 1.0kb upstream 3661 true A01: 9428272-9431932 Brassica rapa FPsc
Brara.A01686 1.0kb upstream 1.0kb upstream 1000 false A01: 9430933-9431932 Brassica rapa FPsc
Brara.A01686 1.0kb downstream 1.0kb downstream 3661 true A01: 9427272-9430932 Brassica rapa FPsc
Brara.A01686 1.0kb downstream 1.0kb downstream 1000 false A01: 9427272-9428271 Brassica rapa FPsc
Brara.A01686 2.0kb upstream 2.0kb upstream 4661 true A01: 9428272-9432932 Brassica rapa FPsc
Brara.A01686 2.0kb upstream 2.0kb upstream 2000 false A01: 9430933-9432932 Brassica rapa FPsc
Brara.A01686 2.0kb downstream 2.0kb downstream 4661 true A01: 9426272-9430932 Brassica rapa FPsc
Brara.A01686 2.0kb downstream 2.0kb downstream 2000 false A01: 9426272-9428271 Brassica rapa FPsc
Brara.A01686 5.0kb upstream 5.0kb upstream 7661 true A01: 9428272-9435932 Brassica rapa FPsc
Brara.A01686 5.0kb upstream 5.0kb upstream 5000 false A01: 9430933-9435932 Brassica rapa FPsc
Brara.A01686 5.0kb downstream 5.0kb downstream 7661 true A01: 9423272-9430932 Brassica rapa FPsc
Brara.A01686 5.0kb downstream 5.0kb downstream 5000 false A01: 9423272-9428271 Brassica rapa FPsc
Brara.A01686 10.0kb upstream 10.0kb upstream 12661 true A01: 9428272-9440932 Brassica rapa FPsc
Brara.A01686 10.0kb upstream 10.0kb upstream 10000 false A01: 9430933-9440932 Brassica rapa FPsc
Brara.A01686 10.0kb downstream 10.0kb downstream 12661 true A01: 9418272-9430932 Brassica rapa FPsc
Brara.A01686 10.0kb downstream 10.0kb downstream 10000 false A01: 9418272-9428271 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122352546 5261 Brassicaceae Singleton cluster - no MSA
123791264 5264 Brassicales-Malvales Singleton cluster - no MSA
124289184 5266 SBM Singleton cluster - no MSA
124251142 5268 Malvidae View MSA
124064342 5270 Rosid View MSA
123740748 5271 Pentapetalae View MSA
122787568 5272 Eudicot View MSA
122042845 5273 Angiosperm View MSA
121345530 5274 Embryophyte View MSA
123425622 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier