Gene : Brara.A01677 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR12854//PTHR12854:SF12 - ATAXIN 2-RELATED Genomic Order:  1677
Name:  ? Brara.A01677 Secondary Identifier:  ? PAC:30638525
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A01677 0.5kb upstream 0.5kb upstream 3799 true A01: 9382042-9385840 Brassica rapa FPsc
Brara.A01677 0.5kb upstream 0.5kb upstream 500 false A01: 9385341-9385840 Brassica rapa FPsc
Brara.A01677 0.5kb downstream 0.5kb downstream 3799 true A01: 9381542-9385340 Brassica rapa FPsc
Brara.A01677 0.5kb downstream 0.5kb downstream 500 false A01: 9381542-9382041 Brassica rapa FPsc
Brara.A01677 1.0kb upstream 1.0kb upstream 4299 true A01: 9382042-9386340 Brassica rapa FPsc
Brara.A01677 1.0kb upstream 1.0kb upstream 1000 false A01: 9385341-9386340 Brassica rapa FPsc
Brara.A01677 1.0kb downstream 1.0kb downstream 4299 true A01: 9381042-9385340 Brassica rapa FPsc
Brara.A01677 1.0kb downstream 1.0kb downstream 1000 false A01: 9381042-9382041 Brassica rapa FPsc
Brara.A01677 2.0kb upstream 2.0kb upstream 5299 true A01: 9382042-9387340 Brassica rapa FPsc
Brara.A01677 2.0kb upstream 2.0kb upstream 2000 false A01: 9385341-9387340 Brassica rapa FPsc
Brara.A01677 2.0kb downstream 2.0kb downstream 5299 true A01: 9380042-9385340 Brassica rapa FPsc
Brara.A01677 2.0kb downstream 2.0kb downstream 2000 false A01: 9380042-9382041 Brassica rapa FPsc
Brara.A01677 5.0kb upstream 5.0kb upstream 8299 true A01: 9382042-9390340 Brassica rapa FPsc
Brara.A01677 5.0kb upstream 5.0kb upstream 5000 false A01: 9385341-9390340 Brassica rapa FPsc
Brara.A01677 5.0kb downstream 5.0kb downstream 8299 true A01: 9377042-9385340 Brassica rapa FPsc
Brara.A01677 5.0kb downstream 5.0kb downstream 5000 false A01: 9377042-9382041 Brassica rapa FPsc
Brara.A01677 10.0kb upstream 10.0kb upstream 13299 true A01: 9382042-9395340 Brassica rapa FPsc
Brara.A01677 10.0kb upstream 10.0kb upstream 10000 false A01: 9385341-9395340 Brassica rapa FPsc
Brara.A01677 10.0kb downstream 10.0kb downstream 13299 true A01: 9372042-9385340 Brassica rapa FPsc
Brara.A01677 10.0kb downstream 10.0kb downstream 10000 false A01: 9372042-9382041 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122352682 5261 Brassicaceae Singleton cluster - no MSA
123839722 5264 Brassicales-Malvales View MSA
124338040 5266 SBM View MSA
124244261 5268 Malvidae View MSA
124064647 5270 Rosid View MSA
123736552 5271 Pentapetalae View MSA
122787256 5272 Eudicot View MSA
122047595 5273 Angiosperm View MSA
121310768 5274 Embryophyte View MSA
123348174 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier