Gene : Brara.A01704 B. rapa FPsc v1.3
Defline:  (1 of 2) 2.1.1.228 - tRNA (guanine(37)-N(1))-methyltransferase / tRNA-(N(1)G37) methyltransferase Genomic Order:  1704
Name:  ? Brara.A01704 Secondary Identifier:  ? PAC:30637580
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6829 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7283 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7286 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A01704 0.5kb upstream 0.5kb upstream 3613 true A01: 9576586-9580198 Brassica rapa FPsc
Brara.A01704 0.5kb upstream 0.5kb upstream 500 false A01: 9579699-9580198 Brassica rapa FPsc
Brara.A01704 0.5kb downstream 0.5kb downstream 3613 true A01: 9576086-9579698 Brassica rapa FPsc
Brara.A01704 0.5kb downstream 0.5kb downstream 500 false A01: 9576086-9576585 Brassica rapa FPsc
Brara.A01704 1.0kb upstream 1.0kb upstream 4113 true A01: 9576586-9580698 Brassica rapa FPsc
Brara.A01704 1.0kb upstream 1.0kb upstream 1000 false A01: 9579699-9580698 Brassica rapa FPsc
Brara.A01704 1.0kb downstream 1.0kb downstream 4113 true A01: 9575586-9579698 Brassica rapa FPsc
Brara.A01704 1.0kb downstream 1.0kb downstream 1000 false A01: 9575586-9576585 Brassica rapa FPsc
Brara.A01704 2.0kb upstream 2.0kb upstream 5113 true A01: 9576586-9581698 Brassica rapa FPsc
Brara.A01704 2.0kb upstream 2.0kb upstream 2000 false A01: 9579699-9581698 Brassica rapa FPsc
Brara.A01704 2.0kb downstream 2.0kb downstream 5113 true A01: 9574586-9579698 Brassica rapa FPsc
Brara.A01704 2.0kb downstream 2.0kb downstream 2000 false A01: 9574586-9576585 Brassica rapa FPsc
Brara.A01704 5.0kb upstream 5.0kb upstream 8113 true A01: 9576586-9584698 Brassica rapa FPsc
Brara.A01704 5.0kb upstream 5.0kb upstream 5000 false A01: 9579699-9584698 Brassica rapa FPsc
Brara.A01704 5.0kb downstream 5.0kb downstream 8113 true A01: 9571586-9579698 Brassica rapa FPsc
Brara.A01704 5.0kb downstream 5.0kb downstream 5000 false A01: 9571586-9576585 Brassica rapa FPsc
Brara.A01704 10.0kb upstream 10.0kb upstream 13113 true A01: 9576586-9589698 Brassica rapa FPsc
Brara.A01704 10.0kb upstream 10.0kb upstream 10000 false A01: 9579699-9589698 Brassica rapa FPsc
Brara.A01704 10.0kb downstream 10.0kb downstream 13113 true A01: 9566586-9579698 Brassica rapa FPsc
Brara.A01704 10.0kb downstream 10.0kb downstream 10000 false A01: 9566586-9576585 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372318 5261 Brassicaceae View MSA
123834818 5264 Brassicales-Malvales View MSA
124345707 5266 SBM View MSA
124243518 5268 Malvidae View MSA
124065435 5270 Rosid View MSA
123747956 5271 Pentapetalae View MSA
122788813 5272 Eudicot View MSA
122045692 5273 Angiosperm View MSA
121347346 5274 Embryophyte View MSA
123426085 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier