Gene : Brara.F02642 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR10666:SF135 - F15I1.6 PROTEIN-RELATED Genomic Order:  2642
Name:  ? Brara.F02642 Secondary Identifier:  ? PAC:30630279
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6351 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6352 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F02642 0.5kb upstream 0.5kb upstream 3571 true A06: 21850487-21854057 Brassica rapa FPsc
Brara.F02642 0.5kb upstream 0.5kb upstream 500 false A06: 21853558-21854057 Brassica rapa FPsc
Brara.F02642 0.5kb downstream 0.5kb downstream 3571 true A06: 21849987-21853557 Brassica rapa FPsc
Brara.F02642 0.5kb downstream 0.5kb downstream 500 false A06: 21849987-21850486 Brassica rapa FPsc
Brara.F02642 1.0kb upstream 1.0kb upstream 4071 true A06: 21850487-21854557 Brassica rapa FPsc
Brara.F02642 1.0kb upstream 1.0kb upstream 1000 false A06: 21853558-21854557 Brassica rapa FPsc
Brara.F02642 1.0kb downstream 1.0kb downstream 4071 true A06: 21849487-21853557 Brassica rapa FPsc
Brara.F02642 1.0kb downstream 1.0kb downstream 1000 false A06: 21849487-21850486 Brassica rapa FPsc
Brara.F02642 2.0kb upstream 2.0kb upstream 5071 true A06: 21850487-21855557 Brassica rapa FPsc
Brara.F02642 2.0kb upstream 2.0kb upstream 2000 false A06: 21853558-21855557 Brassica rapa FPsc
Brara.F02642 2.0kb downstream 2.0kb downstream 5071 true A06: 21848487-21853557 Brassica rapa FPsc
Brara.F02642 2.0kb downstream 2.0kb downstream 2000 false A06: 21848487-21850486 Brassica rapa FPsc
Brara.F02642 5.0kb upstream 5.0kb upstream 8071 true A06: 21850487-21858557 Brassica rapa FPsc
Brara.F02642 5.0kb upstream 5.0kb upstream 5000 false A06: 21853558-21858557 Brassica rapa FPsc
Brara.F02642 5.0kb downstream 5.0kb downstream 8071 true A06: 21845487-21853557 Brassica rapa FPsc
Brara.F02642 5.0kb downstream 5.0kb downstream 5000 false A06: 21845487-21850486 Brassica rapa FPsc
Brara.F02642 10.0kb upstream 10.0kb upstream 13071 true A06: 21850487-21863557 Brassica rapa FPsc
Brara.F02642 10.0kb upstream 10.0kb upstream 10000 false A06: 21853558-21863557 Brassica rapa FPsc
Brara.F02642 10.0kb downstream 10.0kb downstream 13071 true A06: 21840487-21853557 Brassica rapa FPsc
Brara.F02642 10.0kb downstream 10.0kb downstream 10000 false A06: 21840487-21850486 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370293 5261 Brassicaceae View MSA
123840083 5264 Brassicales-Malvales View MSA
124348699 5266 SBM View MSA
124242483 5268 Malvidae View MSA
124070925 5270 Rosid View MSA
123742266 5271 Pentapetalae View MSA
122789753 5272 Eudicot View MSA
122042633 5273 Angiosperm View MSA
121350148 5274 Embryophyte View MSA
123381595 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier