Gene : Brara.D00814 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR20852:SF53 - GLUTAMINE SYNTHETASE, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  814
Name:  ? Brara.D00814 Secondary Identifier:  ? PAC:30621112
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc GLNSYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-3282 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-381 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6549 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6963 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6964 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D00814 0.5kb upstream 0.5kb upstream 3456 true A04: 7206471-7209926 Brassica rapa FPsc
Brara.D00814 0.5kb upstream 0.5kb upstream 500 false A04: 7209427-7209926 Brassica rapa FPsc
Brara.D00814 0.5kb downstream 0.5kb downstream 3456 true A04: 7205971-7209426 Brassica rapa FPsc
Brara.D00814 0.5kb downstream 0.5kb downstream 500 false A04: 7205971-7206470 Brassica rapa FPsc
Brara.D00814 1.0kb upstream 1.0kb upstream 3956 true A04: 7206471-7210426 Brassica rapa FPsc
Brara.D00814 1.0kb upstream 1.0kb upstream 1000 false A04: 7209427-7210426 Brassica rapa FPsc
Brara.D00814 1.0kb downstream 1.0kb downstream 3956 true A04: 7205471-7209426 Brassica rapa FPsc
Brara.D00814 1.0kb downstream 1.0kb downstream 1000 false A04: 7205471-7206470 Brassica rapa FPsc
Brara.D00814 2.0kb upstream 2.0kb upstream 4956 true A04: 7206471-7211426 Brassica rapa FPsc
Brara.D00814 2.0kb upstream 2.0kb upstream 2000 false A04: 7209427-7211426 Brassica rapa FPsc
Brara.D00814 2.0kb downstream 2.0kb downstream 4956 true A04: 7204471-7209426 Brassica rapa FPsc
Brara.D00814 2.0kb downstream 2.0kb downstream 2000 false A04: 7204471-7206470 Brassica rapa FPsc
Brara.D00814 5.0kb upstream 5.0kb upstream 7956 true A04: 7206471-7214426 Brassica rapa FPsc
Brara.D00814 5.0kb upstream 5.0kb upstream 5000 false A04: 7209427-7214426 Brassica rapa FPsc
Brara.D00814 5.0kb downstream 5.0kb downstream 7956 true A04: 7201471-7209426 Brassica rapa FPsc
Brara.D00814 5.0kb downstream 5.0kb downstream 5000 false A04: 7201471-7206470 Brassica rapa FPsc
Brara.D00814 10.0kb upstream 10.0kb upstream 12956 true A04: 7206471-7219426 Brassica rapa FPsc
Brara.D00814 10.0kb upstream 10.0kb upstream 10000 false A04: 7209427-7219426 Brassica rapa FPsc
Brara.D00814 10.0kb downstream 10.0kb downstream 12956 true A04: 7196471-7209426 Brassica rapa FPsc
Brara.D00814 10.0kb downstream 10.0kb downstream 10000 false A04: 7196471-7206470 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363026 5261 Brassicaceae View MSA
123834963 5264 Brassicales-Malvales View MSA
124336894 5266 SBM View MSA
124240193 5268 Malvidae View MSA
124069672 5270 Rosid View MSA
123741738 5271 Pentapetalae View MSA
122788688 5272 Eudicot View MSA
122046528 5273 Angiosperm View MSA
121310618 5274 Embryophyte View MSA
123428761 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier