Gene : Brara.A01558 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR21266:SF25 - PROTOCHLOROPHYLLIDE-DEPENDENT TRANSLOCON COMPONENT 52, CHLOROPLASTIC Genomic Order:  1558
Name:  ? Brara.A01558 Secondary Identifier:  ? PAC:30640093
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5098 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6927 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A01558 0.5kb upstream 0.5kb upstream 2835 true A01: 8666755-8669589 Brassica rapa FPsc
Brara.A01558 0.5kb upstream 0.5kb upstream 500 false A01: 8669090-8669589 Brassica rapa FPsc
Brara.A01558 0.5kb downstream 0.5kb downstream 2835 true A01: 8666255-8669089 Brassica rapa FPsc
Brara.A01558 0.5kb downstream 0.5kb downstream 500 false A01: 8666255-8666754 Brassica rapa FPsc
Brara.A01558 1.0kb upstream 1.0kb upstream 3335 true A01: 8666755-8670089 Brassica rapa FPsc
Brara.A01558 1.0kb upstream 1.0kb upstream 1000 false A01: 8669090-8670089 Brassica rapa FPsc
Brara.A01558 1.0kb downstream 1.0kb downstream 3335 true A01: 8665755-8669089 Brassica rapa FPsc
Brara.A01558 1.0kb downstream 1.0kb downstream 1000 false A01: 8665755-8666754 Brassica rapa FPsc
Brara.A01558 2.0kb upstream 2.0kb upstream 4335 true A01: 8666755-8671089 Brassica rapa FPsc
Brara.A01558 2.0kb upstream 2.0kb upstream 2000 false A01: 8669090-8671089 Brassica rapa FPsc
Brara.A01558 2.0kb downstream 2.0kb downstream 4335 true A01: 8664755-8669089 Brassica rapa FPsc
Brara.A01558 2.0kb downstream 2.0kb downstream 2000 false A01: 8664755-8666754 Brassica rapa FPsc
Brara.A01558 5.0kb upstream 5.0kb upstream 7335 true A01: 8666755-8674089 Brassica rapa FPsc
Brara.A01558 5.0kb upstream 5.0kb upstream 5000 false A01: 8669090-8674089 Brassica rapa FPsc
Brara.A01558 5.0kb downstream 5.0kb downstream 7335 true A01: 8661755-8669089 Brassica rapa FPsc
Brara.A01558 5.0kb downstream 5.0kb downstream 5000 false A01: 8661755-8666754 Brassica rapa FPsc
Brara.A01558 10.0kb upstream 10.0kb upstream 12335 true A01: 8666755-8679089 Brassica rapa FPsc
Brara.A01558 10.0kb upstream 10.0kb upstream 10000 false A01: 8669090-8679089 Brassica rapa FPsc
Brara.A01558 10.0kb downstream 10.0kb downstream 12335 true A01: 8656755-8669089 Brassica rapa FPsc
Brara.A01558 10.0kb downstream 10.0kb downstream 10000 false A01: 8656755-8666754 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370768 5261 Brassicaceae View MSA
123828575 5264 Brassicales-Malvales View MSA
124336609 5266 SBM View MSA
124240236 5268 Malvidae View MSA
124064980 5270 Rosid View MSA
123746425 5271 Pentapetalae View MSA
122797838 5272 Eudicot View MSA
122045189 5273 Angiosperm View MSA
123429167 5275 Viridiplantae View MSA
121347962 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier