Gene : Brara.F02536 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR23416:SF63 - SERINE ACETYLTRANSFERASE 2-RELATED Genomic Order:  2536
Name:  ? Brara.F02536 Secondary Identifier:  ? PAC:30630160
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc CYSTSYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6936 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F02536 0.5kb upstream 0.5kb upstream 3540 true A06: 21236251-21239790 Brassica rapa FPsc
Brara.F02536 0.5kb upstream 0.5kb upstream 500 false A06: 21236251-21236750 Brassica rapa FPsc
Brara.F02536 0.5kb downstream 0.5kb downstream 3540 true A06: 21236751-21240290 Brassica rapa FPsc
Brara.F02536 0.5kb downstream 0.5kb downstream 500 false A06: 21239791-21240290 Brassica rapa FPsc
Brara.F02536 1.0kb upstream 1.0kb upstream 4040 true A06: 21235751-21239790 Brassica rapa FPsc
Brara.F02536 1.0kb upstream 1.0kb upstream 1000 false A06: 21235751-21236750 Brassica rapa FPsc
Brara.F02536 1.0kb downstream 1.0kb downstream 4040 true A06: 21236751-21240790 Brassica rapa FPsc
Brara.F02536 1.0kb downstream 1.0kb downstream 1000 false A06: 21239791-21240790 Brassica rapa FPsc
Brara.F02536 2.0kb upstream 2.0kb upstream 5040 true A06: 21234751-21239790 Brassica rapa FPsc
Brara.F02536 2.0kb upstream 2.0kb upstream 2000 false A06: 21234751-21236750 Brassica rapa FPsc
Brara.F02536 2.0kb downstream 2.0kb downstream 5040 true A06: 21236751-21241790 Brassica rapa FPsc
Brara.F02536 2.0kb downstream 2.0kb downstream 2000 false A06: 21239791-21241790 Brassica rapa FPsc
Brara.F02536 5.0kb upstream 5.0kb upstream 8040 true A06: 21231751-21239790 Brassica rapa FPsc
Brara.F02536 5.0kb upstream 5.0kb upstream 5000 false A06: 21231751-21236750 Brassica rapa FPsc
Brara.F02536 5.0kb downstream 5.0kb downstream 8040 true A06: 21236751-21244790 Brassica rapa FPsc
Brara.F02536 5.0kb downstream 5.0kb downstream 5000 false A06: 21239791-21244790 Brassica rapa FPsc
Brara.F02536 10.0kb upstream 10.0kb upstream 13040 true A06: 21226751-21239790 Brassica rapa FPsc
Brara.F02536 10.0kb upstream 10.0kb upstream 10000 false A06: 21226751-21236750 Brassica rapa FPsc
Brara.F02536 10.0kb downstream 10.0kb downstream 13040 true A06: 21236751-21249790 Brassica rapa FPsc
Brara.F02536 10.0kb downstream 10.0kb downstream 10000 false A06: 21239791-21249790 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363460 5261 Brassicaceae View MSA
123838527 5264 Brassicales-Malvales View MSA
124322470 5266 SBM View MSA
124240190 5268 Malvidae View MSA
124063279 5270 Rosid View MSA
123743402 5271 Pentapetalae View MSA
122788102 5272 Eudicot View MSA
122045908 5273 Angiosperm View MSA
121349787 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier