Gene : Brara.F02566 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR33734:SF5 - LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 Genomic Order:  2566
Name:  ? Brara.F02566 Secondary Identifier:  ? PAC:30630699
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F02566 0.5kb upstream 0.5kb upstream 2420 true A06: 21445079-21447498 Brassica rapa FPsc
Brara.F02566 0.5kb upstream 0.5kb upstream 500 false A06: 21446999-21447498 Brassica rapa FPsc
Brara.F02566 0.5kb downstream 0.5kb downstream 2420 true A06: 21444579-21446998 Brassica rapa FPsc
Brara.F02566 0.5kb downstream 0.5kb downstream 500 false A06: 21444579-21445078 Brassica rapa FPsc
Brara.F02566 1.0kb upstream 1.0kb upstream 2920 true A06: 21445079-21447998 Brassica rapa FPsc
Brara.F02566 1.0kb upstream 1.0kb upstream 1000 false A06: 21446999-21447998 Brassica rapa FPsc
Brara.F02566 1.0kb downstream 1.0kb downstream 2920 true A06: 21444079-21446998 Brassica rapa FPsc
Brara.F02566 1.0kb downstream 1.0kb downstream 1000 false A06: 21444079-21445078 Brassica rapa FPsc
Brara.F02566 2.0kb upstream 2.0kb upstream 3920 true A06: 21445079-21448998 Brassica rapa FPsc
Brara.F02566 2.0kb upstream 2.0kb upstream 2000 false A06: 21446999-21448998 Brassica rapa FPsc
Brara.F02566 2.0kb downstream 2.0kb downstream 3920 true A06: 21443079-21446998 Brassica rapa FPsc
Brara.F02566 2.0kb downstream 2.0kb downstream 2000 false A06: 21443079-21445078 Brassica rapa FPsc
Brara.F02566 5.0kb upstream 5.0kb upstream 6920 true A06: 21445079-21451998 Brassica rapa FPsc
Brara.F02566 5.0kb upstream 5.0kb upstream 5000 false A06: 21446999-21451998 Brassica rapa FPsc
Brara.F02566 5.0kb downstream 5.0kb downstream 6920 true A06: 21440079-21446998 Brassica rapa FPsc
Brara.F02566 5.0kb downstream 5.0kb downstream 5000 false A06: 21440079-21445078 Brassica rapa FPsc
Brara.F02566 10.0kb upstream 10.0kb upstream 11920 true A06: 21445079-21456998 Brassica rapa FPsc
Brara.F02566 10.0kb upstream 10.0kb upstream 10000 false A06: 21446999-21456998 Brassica rapa FPsc
Brara.F02566 10.0kb downstream 10.0kb downstream 11920 true A06: 21435079-21446998 Brassica rapa FPsc
Brara.F02566 10.0kb downstream 10.0kb downstream 10000 false A06: 21435079-21445078 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041196 5273 Angiosperm View MSA
122350762 5261 Brassicaceae Singleton cluster - no MSA
123789737 5264 Brassicales-Malvales Singleton cluster - no MSA
124287726 5266 SBM Singleton cluster - no MSA
124251635 5268 Malvidae View MSA
124066383 5270 Rosid View MSA
123740270 5271 Pentapetalae View MSA
122790310 5272 Eudicot View MSA
121350262 5274 Embryophyte View MSA
123381651 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier