Gene : Brara.F02587 B. rapa FPsc v1.3
Defline:  (1 of 3) 2.7.1.91 - Sphinganine kinase / Dihydrosphingosine kinase Genomic Order:  2587
Name:  ? Brara.F02587 Secondary Identifier:  ? PAC:30628641
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5129 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6483 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F02587 0.5kb upstream 0.5kb upstream 4784 true A06: 21548251-21553034 Brassica rapa FPsc
Brara.F02587 0.5kb upstream 0.5kb upstream 500 false A06: 21552535-21553034 Brassica rapa FPsc
Brara.F02587 0.5kb downstream 0.5kb downstream 4784 true A06: 21547751-21552534 Brassica rapa FPsc
Brara.F02587 0.5kb downstream 0.5kb downstream 500 false A06: 21547751-21548250 Brassica rapa FPsc
Brara.F02587 1.0kb upstream 1.0kb upstream 5284 true A06: 21548251-21553534 Brassica rapa FPsc
Brara.F02587 1.0kb upstream 1.0kb upstream 1000 false A06: 21552535-21553534 Brassica rapa FPsc
Brara.F02587 1.0kb downstream 1.0kb downstream 5284 true A06: 21547251-21552534 Brassica rapa FPsc
Brara.F02587 1.0kb downstream 1.0kb downstream 1000 false A06: 21547251-21548250 Brassica rapa FPsc
Brara.F02587 2.0kb upstream 2.0kb upstream 6284 true A06: 21548251-21554534 Brassica rapa FPsc
Brara.F02587 2.0kb upstream 2.0kb upstream 2000 false A06: 21552535-21554534 Brassica rapa FPsc
Brara.F02587 2.0kb downstream 2.0kb downstream 6284 true A06: 21546251-21552534 Brassica rapa FPsc
Brara.F02587 2.0kb downstream 2.0kb downstream 2000 false A06: 21546251-21548250 Brassica rapa FPsc
Brara.F02587 5.0kb upstream 5.0kb upstream 9284 true A06: 21548251-21557534 Brassica rapa FPsc
Brara.F02587 5.0kb upstream 5.0kb upstream 5000 false A06: 21552535-21557534 Brassica rapa FPsc
Brara.F02587 5.0kb downstream 5.0kb downstream 9284 true A06: 21543251-21552534 Brassica rapa FPsc
Brara.F02587 5.0kb downstream 5.0kb downstream 5000 false A06: 21543251-21548250 Brassica rapa FPsc
Brara.F02587 10.0kb upstream 10.0kb upstream 14284 true A06: 21548251-21562534 Brassica rapa FPsc
Brara.F02587 10.0kb upstream 10.0kb upstream 10000 false A06: 21552535-21562534 Brassica rapa FPsc
Brara.F02587 10.0kb downstream 10.0kb downstream 14284 true A06: 21538251-21552534 Brassica rapa FPsc
Brara.F02587 10.0kb downstream 10.0kb downstream 10000 false A06: 21538251-21548250 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363319 5261 Brassicaceae View MSA
123836450 5264 Brassicales-Malvales View MSA
124345813 5266 SBM View MSA
124254227 5268 Malvidae View MSA
124074924 5270 Rosid View MSA
123752126 5271 Pentapetalae View MSA
122793643 5272 Eudicot View MSA
122046814 5273 Angiosperm View MSA
121349004 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier