Gene : Brara.F02287 B. rapa FPsc v1.3
Defline:  (1 of 4) 6.1.1.17 - Glutamate--tRNA ligase / Glutamyl-tRNA synthetase Genomic Order:  2287
Name:  ? Brara.F02287 Secondary Identifier:  ? PAC:30627645
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5188 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5918 Brassica rapa FPsc pathologic  
BrapaFPsc TRNA-CHARGING-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F02287 0.5kb upstream 0.5kb upstream 3486 true A06: 19376998-19380483 Brassica rapa FPsc
Brara.F02287 0.5kb upstream 0.5kb upstream 500 false A06: 19379984-19380483 Brassica rapa FPsc
Brara.F02287 0.5kb downstream 0.5kb downstream 3486 true A06: 19376498-19379983 Brassica rapa FPsc
Brara.F02287 0.5kb downstream 0.5kb downstream 500 false A06: 19376498-19376997 Brassica rapa FPsc
Brara.F02287 1.0kb upstream 1.0kb upstream 3986 true A06: 19376998-19380983 Brassica rapa FPsc
Brara.F02287 1.0kb upstream 1.0kb upstream 1000 false A06: 19379984-19380983 Brassica rapa FPsc
Brara.F02287 1.0kb downstream 1.0kb downstream 3986 true A06: 19375998-19379983 Brassica rapa FPsc
Brara.F02287 1.0kb downstream 1.0kb downstream 1000 false A06: 19375998-19376997 Brassica rapa FPsc
Brara.F02287 2.0kb upstream 2.0kb upstream 4986 true A06: 19376998-19381983 Brassica rapa FPsc
Brara.F02287 2.0kb upstream 2.0kb upstream 2000 false A06: 19379984-19381983 Brassica rapa FPsc
Brara.F02287 2.0kb downstream 2.0kb downstream 4986 true A06: 19374998-19379983 Brassica rapa FPsc
Brara.F02287 2.0kb downstream 2.0kb downstream 2000 false A06: 19374998-19376997 Brassica rapa FPsc
Brara.F02287 5.0kb upstream 5.0kb upstream 7986 true A06: 19376998-19384983 Brassica rapa FPsc
Brara.F02287 5.0kb upstream 5.0kb upstream 5000 false A06: 19379984-19384983 Brassica rapa FPsc
Brara.F02287 5.0kb downstream 5.0kb downstream 7986 true A06: 19371998-19379983 Brassica rapa FPsc
Brara.F02287 5.0kb downstream 5.0kb downstream 5000 false A06: 19371998-19376997 Brassica rapa FPsc
Brara.F02287 10.0kb upstream 10.0kb upstream 12986 true A06: 19376998-19389983 Brassica rapa FPsc
Brara.F02287 10.0kb upstream 10.0kb upstream 10000 false A06: 19379984-19389983 Brassica rapa FPsc
Brara.F02287 10.0kb downstream 10.0kb downstream 12986 true A06: 19366998-19379983 Brassica rapa FPsc
Brara.F02287 10.0kb downstream 10.0kb downstream 10000 false A06: 19366998-19376997 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368604 5261 Brassicaceae View MSA
123832530 5264 Brassicales-Malvales View MSA
124344288 5266 SBM View MSA
124238938 5268 Malvidae View MSA
124063360 5270 Rosid View MSA
123737264 5271 Pentapetalae View MSA
122787973 5272 Eudicot View MSA
122041760 5273 Angiosperm View MSA
121345245 5274 Embryophyte View MSA
123424323 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier