Gene : Brara.A01508 B. rapa FPsc v1.3
Defline:  (1 of 2) 2.1.1.11 - Magnesium protoporphyrin IX methyltransferase / S-adenosylmethioninemagnesium protoporphyrin methyltransferase Genomic Order:  1508
Name:  ? Brara.A01508 Secondary Identifier:  ? PAC:30638483
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc CHLOROPHYLL-SYN Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A01508 0.5kb upstream 0.5kb upstream 1796 true A01: 8387966-8389761 Brassica rapa FPsc
Brara.A01508 0.5kb upstream 0.5kb upstream 500 false A01: 8387966-8388465 Brassica rapa FPsc
Brara.A01508 0.5kb downstream 0.5kb downstream 1796 true A01: 8388466-8390261 Brassica rapa FPsc
Brara.A01508 0.5kb downstream 0.5kb downstream 500 false A01: 8389762-8390261 Brassica rapa FPsc
Brara.A01508 1.0kb upstream 1.0kb upstream 2296 true A01: 8387466-8389761 Brassica rapa FPsc
Brara.A01508 1.0kb upstream 1.0kb upstream 1000 false A01: 8387466-8388465 Brassica rapa FPsc
Brara.A01508 1.0kb downstream 1.0kb downstream 2296 true A01: 8388466-8390761 Brassica rapa FPsc
Brara.A01508 1.0kb downstream 1.0kb downstream 1000 false A01: 8389762-8390761 Brassica rapa FPsc
Brara.A01508 2.0kb upstream 2.0kb upstream 3296 true A01: 8386466-8389761 Brassica rapa FPsc
Brara.A01508 2.0kb upstream 2.0kb upstream 2000 false A01: 8386466-8388465 Brassica rapa FPsc
Brara.A01508 2.0kb downstream 2.0kb downstream 3296 true A01: 8388466-8391761 Brassica rapa FPsc
Brara.A01508 2.0kb downstream 2.0kb downstream 2000 false A01: 8389762-8391761 Brassica rapa FPsc
Brara.A01508 5.0kb upstream 5.0kb upstream 6296 true A01: 8383466-8389761 Brassica rapa FPsc
Brara.A01508 5.0kb upstream 5.0kb upstream 5000 false A01: 8383466-8388465 Brassica rapa FPsc
Brara.A01508 5.0kb downstream 5.0kb downstream 6296 true A01: 8388466-8394761 Brassica rapa FPsc
Brara.A01508 5.0kb downstream 5.0kb downstream 5000 false A01: 8389762-8394761 Brassica rapa FPsc
Brara.A01508 10.0kb upstream 10.0kb upstream 11296 true A01: 8378466-8389761 Brassica rapa FPsc
Brara.A01508 10.0kb upstream 10.0kb upstream 10000 false A01: 8378466-8388465 Brassica rapa FPsc
Brara.A01508 10.0kb downstream 10.0kb downstream 11296 true A01: 8388466-8399761 Brassica rapa FPsc
Brara.A01508 10.0kb downstream 10.0kb downstream 10000 false A01: 8389762-8399761 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377019 5261 Brassicaceae View MSA
123828001 5264 Brassicales-Malvales View MSA
124344957 5266 SBM View MSA
124250095 5268 Malvidae View MSA
124063619 5270 Rosid View MSA
123739209 5271 Pentapetalae View MSA
122792870 5272 Eudicot View MSA
122043100 5273 Angiosperm View MSA
121345477 5274 Embryophyte View MSA
123424951 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier