Gene : Brara.F02185 B. rapa FPsc v1.3
Defline:  (1 of 2) 1.1.1.267 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase / DXP-reductoisomerase Genomic Order:  2185
Name:  ? Brara.F02185 Secondary Identifier:  ? PAC:30629745
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7560 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F02185 0.5kb upstream 0.5kb upstream 3564 true A06: 18678450-18682013 Brassica rapa FPsc
Brara.F02185 0.5kb upstream 0.5kb upstream 500 false A06: 18681514-18682013 Brassica rapa FPsc
Brara.F02185 0.5kb downstream 0.5kb downstream 3564 true A06: 18677950-18681513 Brassica rapa FPsc
Brara.F02185 0.5kb downstream 0.5kb downstream 500 false A06: 18677950-18678449 Brassica rapa FPsc
Brara.F02185 1.0kb upstream 1.0kb upstream 4064 true A06: 18678450-18682513 Brassica rapa FPsc
Brara.F02185 1.0kb upstream 1.0kb upstream 1000 false A06: 18681514-18682513 Brassica rapa FPsc
Brara.F02185 1.0kb downstream 1.0kb downstream 4064 true A06: 18677450-18681513 Brassica rapa FPsc
Brara.F02185 1.0kb downstream 1.0kb downstream 1000 false A06: 18677450-18678449 Brassica rapa FPsc
Brara.F02185 2.0kb upstream 2.0kb upstream 5064 true A06: 18678450-18683513 Brassica rapa FPsc
Brara.F02185 2.0kb upstream 2.0kb upstream 2000 false A06: 18681514-18683513 Brassica rapa FPsc
Brara.F02185 2.0kb downstream 2.0kb downstream 5064 true A06: 18676450-18681513 Brassica rapa FPsc
Brara.F02185 2.0kb downstream 2.0kb downstream 2000 false A06: 18676450-18678449 Brassica rapa FPsc
Brara.F02185 5.0kb upstream 5.0kb upstream 8064 true A06: 18678450-18686513 Brassica rapa FPsc
Brara.F02185 5.0kb upstream 5.0kb upstream 5000 false A06: 18681514-18686513 Brassica rapa FPsc
Brara.F02185 5.0kb downstream 5.0kb downstream 8064 true A06: 18673450-18681513 Brassica rapa FPsc
Brara.F02185 5.0kb downstream 5.0kb downstream 5000 false A06: 18673450-18678449 Brassica rapa FPsc
Brara.F02185 10.0kb upstream 10.0kb upstream 13064 true A06: 18678450-18691513 Brassica rapa FPsc
Brara.F02185 10.0kb upstream 10.0kb upstream 10000 false A06: 18681514-18691513 Brassica rapa FPsc
Brara.F02185 10.0kb downstream 10.0kb downstream 13064 true A06: 18668450-18681513 Brassica rapa FPsc
Brara.F02185 10.0kb downstream 10.0kb downstream 10000 false A06: 18668450-18678449 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041406 5273 Angiosperm View MSA
122375878 5261 Brassicaceae View MSA
123827755 5264 Brassicales-Malvales View MSA
124341581 5266 SBM View MSA
124238446 5268 Malvidae View MSA
124066605 5270 Rosid View MSA
123736883 5271 Pentapetalae View MSA
122791920 5272 Eudicot View MSA
121344534 5274 Embryophyte View MSA
123424385 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier