Gene : Brara.A01528 B. rapa FPsc v1.3
Defline:  (1 of 10) PTHR31080:SF2 - F23N19.14-RELATED Genomic Order:  1528
Name:  ? Brara.A01528 Secondary Identifier:  ? PAC:30636387
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-1081 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A01528 0.5kb upstream 0.5kb upstream 1296 true A01: 8475648-8476943 Brassica rapa FPsc
Brara.A01528 0.5kb upstream 0.5kb upstream 500 false A01: 8475648-8476147 Brassica rapa FPsc
Brara.A01528 0.5kb downstream 0.5kb downstream 1296 true A01: 8476148-8477443 Brassica rapa FPsc
Brara.A01528 0.5kb downstream 0.5kb downstream 500 false A01: 8476944-8477443 Brassica rapa FPsc
Brara.A01528 1.0kb upstream 1.0kb upstream 1796 true A01: 8475148-8476943 Brassica rapa FPsc
Brara.A01528 1.0kb upstream 1.0kb upstream 1000 false A01: 8475148-8476147 Brassica rapa FPsc
Brara.A01528 1.0kb downstream 1.0kb downstream 1796 true A01: 8476148-8477943 Brassica rapa FPsc
Brara.A01528 1.0kb downstream 1.0kb downstream 1000 false A01: 8476944-8477943 Brassica rapa FPsc
Brara.A01528 2.0kb upstream 2.0kb upstream 2796 true A01: 8474148-8476943 Brassica rapa FPsc
Brara.A01528 2.0kb upstream 2.0kb upstream 2000 false A01: 8474148-8476147 Brassica rapa FPsc
Brara.A01528 2.0kb downstream 2.0kb downstream 2796 true A01: 8476148-8478943 Brassica rapa FPsc
Brara.A01528 2.0kb downstream 2.0kb downstream 2000 false A01: 8476944-8478943 Brassica rapa FPsc
Brara.A01528 5.0kb upstream 5.0kb upstream 5796 true A01: 8471148-8476943 Brassica rapa FPsc
Brara.A01528 5.0kb upstream 5.0kb upstream 5000 false A01: 8471148-8476147 Brassica rapa FPsc
Brara.A01528 5.0kb downstream 5.0kb downstream 5796 true A01: 8476148-8481943 Brassica rapa FPsc
Brara.A01528 5.0kb downstream 5.0kb downstream 5000 false A01: 8476944-8481943 Brassica rapa FPsc
Brara.A01528 10.0kb upstream 10.0kb upstream 10796 true A01: 8466148-8476943 Brassica rapa FPsc
Brara.A01528 10.0kb upstream 10.0kb upstream 10000 false A01: 8466148-8476147 Brassica rapa FPsc
Brara.A01528 10.0kb downstream 10.0kb downstream 10796 true A01: 8476148-8486943 Brassica rapa FPsc
Brara.A01528 10.0kb downstream 10.0kb downstream 10000 false A01: 8476944-8486943 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362171 5261 Brassicaceae View MSA
123837730 5264 Brassicales-Malvales View MSA
124338445 5266 SBM View MSA
124251328 5268 Malvidae View MSA
124069066 5270 Rosid View MSA
123751304 5271 Pentapetalae View MSA
122797599 5272 Eudicot View MSA
122046899 5273 Angiosperm View MSA
121310670 5274 Embryophyte View MSA
123348096 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier