Gene : Brara.D00698 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR11946//PTHR11946:SF78 - ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES Genomic Order:  698
Name:  ? Brara.D00698 Secondary Identifier:  ? PAC:30620932
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc TRNA-CHARGING-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D00698 0.5kb upstream 0.5kb upstream 5773 true A04: 5721136-5726908 Brassica rapa FPsc
Brara.D00698 0.5kb upstream 0.5kb upstream 500 false A04: 5721136-5721635 Brassica rapa FPsc
Brara.D00698 0.5kb downstream 0.5kb downstream 5773 true A04: 5721636-5727408 Brassica rapa FPsc
Brara.D00698 0.5kb downstream 0.5kb downstream 500 false A04: 5726909-5727408 Brassica rapa FPsc
Brara.D00698 1.0kb upstream 1.0kb upstream 6273 true A04: 5720636-5726908 Brassica rapa FPsc
Brara.D00698 1.0kb upstream 1.0kb upstream 1000 false A04: 5720636-5721635 Brassica rapa FPsc
Brara.D00698 1.0kb downstream 1.0kb downstream 6273 true A04: 5721636-5727908 Brassica rapa FPsc
Brara.D00698 1.0kb downstream 1.0kb downstream 1000 false A04: 5726909-5727908 Brassica rapa FPsc
Brara.D00698 2.0kb upstream 2.0kb upstream 7273 true A04: 5719636-5726908 Brassica rapa FPsc
Brara.D00698 2.0kb upstream 2.0kb upstream 2000 false A04: 5719636-5721635 Brassica rapa FPsc
Brara.D00698 2.0kb downstream 2.0kb downstream 7273 true A04: 5721636-5728908 Brassica rapa FPsc
Brara.D00698 2.0kb downstream 2.0kb downstream 2000 false A04: 5726909-5728908 Brassica rapa FPsc
Brara.D00698 5.0kb upstream 5.0kb upstream 10273 true A04: 5716636-5726908 Brassica rapa FPsc
Brara.D00698 5.0kb upstream 5.0kb upstream 5000 false A04: 5716636-5721635 Brassica rapa FPsc
Brara.D00698 5.0kb downstream 5.0kb downstream 10273 true A04: 5721636-5731908 Brassica rapa FPsc
Brara.D00698 5.0kb downstream 5.0kb downstream 5000 false A04: 5726909-5731908 Brassica rapa FPsc
Brara.D00698 10.0kb upstream 10.0kb upstream 15273 true A04: 5711636-5726908 Brassica rapa FPsc
Brara.D00698 10.0kb upstream 10.0kb upstream 10000 false A04: 5711636-5721635 Brassica rapa FPsc
Brara.D00698 10.0kb downstream 10.0kb downstream 15273 true A04: 5721636-5736908 Brassica rapa FPsc
Brara.D00698 10.0kb downstream 10.0kb downstream 10000 false A04: 5726909-5736908 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367230 5261 Brassicaceae View MSA
123828718 5264 Brassicales-Malvales View MSA
124338406 5266 SBM View MSA
124247313 5268 Malvidae View MSA
124066402 5270 Rosid View MSA
123739463 5271 Pentapetalae View MSA
122793532 5272 Eudicot View MSA
122041539 5273 Angiosperm View MSA
121348816 5274 Embryophyte View MSA
123428788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier