Gene : Brara.F02207 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR10168:SF73 - GLUTAREDOXIN-C1 Genomic Order:  2207
Name:  ? Brara.F02207 Secondary Identifier:  ? PAC:30627988
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc THIOREDOX-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F02207 0.5kb upstream 0.5kb upstream 1710 true A06: 18868481-18870190 Brassica rapa FPsc
Brara.F02207 0.5kb upstream 0.5kb upstream 500 false A06: 18869691-18870190 Brassica rapa FPsc
Brara.F02207 0.5kb downstream 0.5kb downstream 1710 true A06: 18867981-18869690 Brassica rapa FPsc
Brara.F02207 0.5kb downstream 0.5kb downstream 500 false A06: 18867981-18868480 Brassica rapa FPsc
Brara.F02207 1.0kb upstream 1.0kb upstream 2210 true A06: 18868481-18870690 Brassica rapa FPsc
Brara.F02207 1.0kb upstream 1.0kb upstream 1000 false A06: 18869691-18870690 Brassica rapa FPsc
Brara.F02207 1.0kb downstream 1.0kb downstream 2210 true A06: 18867481-18869690 Brassica rapa FPsc
Brara.F02207 1.0kb downstream 1.0kb downstream 1000 false A06: 18867481-18868480 Brassica rapa FPsc
Brara.F02207 2.0kb upstream 2.0kb upstream 3210 true A06: 18868481-18871690 Brassica rapa FPsc
Brara.F02207 2.0kb upstream 2.0kb upstream 2000 false A06: 18869691-18871690 Brassica rapa FPsc
Brara.F02207 2.0kb downstream 2.0kb downstream 3210 true A06: 18866481-18869690 Brassica rapa FPsc
Brara.F02207 2.0kb downstream 2.0kb downstream 2000 false A06: 18866481-18868480 Brassica rapa FPsc
Brara.F02207 5.0kb upstream 5.0kb upstream 6210 true A06: 18868481-18874690 Brassica rapa FPsc
Brara.F02207 5.0kb upstream 5.0kb upstream 5000 false A06: 18869691-18874690 Brassica rapa FPsc
Brara.F02207 5.0kb downstream 5.0kb downstream 6210 true A06: 18863481-18869690 Brassica rapa FPsc
Brara.F02207 5.0kb downstream 5.0kb downstream 5000 false A06: 18863481-18868480 Brassica rapa FPsc
Brara.F02207 10.0kb upstream 10.0kb upstream 11210 true A06: 18868481-18879690 Brassica rapa FPsc
Brara.F02207 10.0kb upstream 10.0kb upstream 10000 false A06: 18869691-18879690 Brassica rapa FPsc
Brara.F02207 10.0kb downstream 10.0kb downstream 11210 true A06: 18858481-18869690 Brassica rapa FPsc
Brara.F02207 10.0kb downstream 10.0kb downstream 10000 false A06: 18858481-18868480 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122350180 5261 Brassicaceae Singleton cluster - no MSA
123840210 5264 Brassicales-Malvales View MSA
124341739 5266 SBM View MSA
124243445 5268 Malvidae View MSA
124060631 5270 Rosid View MSA
123740735 5271 Pentapetalae View MSA
122795168 5272 Eudicot View MSA
122042909 5273 Angiosperm View MSA
121349337 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier