Gene : Brara.F02224 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR11349:SF44 - NUCLEOSIDE DIPHOSPHATE KINASE II, CHLOROPLASTIC Genomic Order:  2224
Name:  ? Brara.F02224 Secondary Identifier:  ? PAC:30629449
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Sequence Feature Displayer

Ontology Annotation Displayer

20 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY0-162 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6126 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7176 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7184 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7196 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7197 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7200 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7205 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7208 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7210 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7211 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7220 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7221 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7222 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7224 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7226 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7227 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7228 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7229 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-841 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F02224 0.5kb upstream 0.5kb upstream 2247 true A06: 18987696-18989942 Brassica rapa FPsc
Brara.F02224 0.5kb upstream 0.5kb upstream 500 false A06: 18989443-18989942 Brassica rapa FPsc
Brara.F02224 0.5kb downstream 0.5kb downstream 2247 true A06: 18987196-18989442 Brassica rapa FPsc
Brara.F02224 0.5kb downstream 0.5kb downstream 500 false A06: 18987196-18987695 Brassica rapa FPsc
Brara.F02224 1.0kb upstream 1.0kb upstream 2747 true A06: 18987696-18990442 Brassica rapa FPsc
Brara.F02224 1.0kb upstream 1.0kb upstream 1000 false A06: 18989443-18990442 Brassica rapa FPsc
Brara.F02224 1.0kb downstream 1.0kb downstream 2747 true A06: 18986696-18989442 Brassica rapa FPsc
Brara.F02224 1.0kb downstream 1.0kb downstream 1000 false A06: 18986696-18987695 Brassica rapa FPsc
Brara.F02224 2.0kb upstream 2.0kb upstream 3747 true A06: 18987696-18991442 Brassica rapa FPsc
Brara.F02224 2.0kb upstream 2.0kb upstream 2000 false A06: 18989443-18991442 Brassica rapa FPsc
Brara.F02224 2.0kb downstream 2.0kb downstream 3747 true A06: 18985696-18989442 Brassica rapa FPsc
Brara.F02224 2.0kb downstream 2.0kb downstream 2000 false A06: 18985696-18987695 Brassica rapa FPsc
Brara.F02224 5.0kb upstream 5.0kb upstream 6747 true A06: 18987696-18994442 Brassica rapa FPsc
Brara.F02224 5.0kb upstream 5.0kb upstream 5000 false A06: 18989443-18994442 Brassica rapa FPsc
Brara.F02224 5.0kb downstream 5.0kb downstream 6747 true A06: 18982696-18989442 Brassica rapa FPsc
Brara.F02224 5.0kb downstream 5.0kb downstream 5000 false A06: 18982696-18987695 Brassica rapa FPsc
Brara.F02224 10.0kb upstream 10.0kb upstream 11747 true A06: 18987696-18999442 Brassica rapa FPsc
Brara.F02224 10.0kb upstream 10.0kb upstream 10000 false A06: 18989443-18999442 Brassica rapa FPsc
Brara.F02224 10.0kb downstream 10.0kb downstream 11747 true A06: 18977696-18989442 Brassica rapa FPsc
Brara.F02224 10.0kb downstream 10.0kb downstream 10000 false A06: 18977696-18987695 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372106 5261 Brassicaceae View MSA
123832017 5264 Brassicales-Malvales View MSA
124342170 5266 SBM View MSA
124242132 5268 Malvidae View MSA
124063920 5270 Rosid View MSA
123743535 5271 Pentapetalae View MSA
122788809 5272 Eudicot View MSA
122050213 5273 Angiosperm View MSA
123428962 5275 Viridiplantae View MSA
121346571 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier