Gene : Brara.F02099 B. rapa FPsc v1.3
Defline:  (1 of 3) 1.2.1.8 - Betaine-aldehyde dehydrogenase / Betaine aldehyde oxidase Genomic Order:  2099
Name:  ? Brara.F02099 Secondary Identifier:  ? PAC:30630770
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY1F-353 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F02099 0.5kb upstream 0.5kb upstream 4238 true A06: 17613495-17617732 Brassica rapa FPsc
Brara.F02099 0.5kb upstream 0.5kb upstream 500 false A06: 17617233-17617732 Brassica rapa FPsc
Brara.F02099 0.5kb downstream 0.5kb downstream 4238 true A06: 17612995-17617232 Brassica rapa FPsc
Brara.F02099 0.5kb downstream 0.5kb downstream 500 false A06: 17612995-17613494 Brassica rapa FPsc
Brara.F02099 1.0kb upstream 1.0kb upstream 4738 true A06: 17613495-17618232 Brassica rapa FPsc
Brara.F02099 1.0kb upstream 1.0kb upstream 1000 false A06: 17617233-17618232 Brassica rapa FPsc
Brara.F02099 1.0kb downstream 1.0kb downstream 4738 true A06: 17612495-17617232 Brassica rapa FPsc
Brara.F02099 1.0kb downstream 1.0kb downstream 1000 false A06: 17612495-17613494 Brassica rapa FPsc
Brara.F02099 2.0kb upstream 2.0kb upstream 5738 true A06: 17613495-17619232 Brassica rapa FPsc
Brara.F02099 2.0kb upstream 2.0kb upstream 2000 false A06: 17617233-17619232 Brassica rapa FPsc
Brara.F02099 2.0kb downstream 2.0kb downstream 5738 true A06: 17611495-17617232 Brassica rapa FPsc
Brara.F02099 2.0kb downstream 2.0kb downstream 2000 false A06: 17611495-17613494 Brassica rapa FPsc
Brara.F02099 5.0kb upstream 5.0kb upstream 8738 true A06: 17613495-17622232 Brassica rapa FPsc
Brara.F02099 5.0kb upstream 5.0kb upstream 5000 false A06: 17617233-17622232 Brassica rapa FPsc
Brara.F02099 5.0kb downstream 5.0kb downstream 8738 true A06: 17608495-17617232 Brassica rapa FPsc
Brara.F02099 5.0kb downstream 5.0kb downstream 5000 false A06: 17608495-17613494 Brassica rapa FPsc
Brara.F02099 10.0kb upstream 10.0kb upstream 13738 true A06: 17613495-17627232 Brassica rapa FPsc
Brara.F02099 10.0kb upstream 10.0kb upstream 10000 false A06: 17617233-17627232 Brassica rapa FPsc
Brara.F02099 10.0kb downstream 10.0kb downstream 13738 true A06: 17603495-17617232 Brassica rapa FPsc
Brara.F02099 10.0kb downstream 10.0kb downstream 10000 false A06: 17603495-17613494 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368114 5261 Brassicaceae View MSA
123799492 5264 Brassicales-Malvales View MSA
124297008 5266 SBM View MSA
124244269 5268 Malvidae View MSA
124063957 5270 Rosid View MSA
123742074 5271 Pentapetalae View MSA
122792963 5272 Eudicot View MSA
122042877 5273 Angiosperm View MSA
121345365 5274 Embryophyte View MSA
123427690 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier