Gene : Brara.A01346 B. rapa FPsc v1.3
Defline:  (1 of 4) 3.2.2.22 - rRNA N-glycosylase / rRNA N-glycosidase Genomic Order:  1346
Name:  ? Brara.A01346 Secondary Identifier:  ? PAC:30638970
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-1081 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A01346 0.5kb upstream 0.5kb upstream 1536 true A01: 7252770-7254305 Brassica rapa FPsc
Brara.A01346 0.5kb upstream 0.5kb upstream 500 false A01: 7252770-7253269 Brassica rapa FPsc
Brara.A01346 0.5kb downstream 0.5kb downstream 1536 true A01: 7253270-7254805 Brassica rapa FPsc
Brara.A01346 0.5kb downstream 0.5kb downstream 500 false A01: 7254306-7254805 Brassica rapa FPsc
Brara.A01346 1.0kb upstream 1.0kb upstream 2036 true A01: 7252270-7254305 Brassica rapa FPsc
Brara.A01346 1.0kb upstream 1.0kb upstream 1000 false A01: 7252270-7253269 Brassica rapa FPsc
Brara.A01346 1.0kb downstream 1.0kb downstream 2036 true A01: 7253270-7255305 Brassica rapa FPsc
Brara.A01346 1.0kb downstream 1.0kb downstream 1000 false A01: 7254306-7255305 Brassica rapa FPsc
Brara.A01346 2.0kb upstream 2.0kb upstream 3036 true A01: 7251270-7254305 Brassica rapa FPsc
Brara.A01346 2.0kb upstream 2.0kb upstream 2000 false A01: 7251270-7253269 Brassica rapa FPsc
Brara.A01346 2.0kb downstream 2.0kb downstream 3036 true A01: 7253270-7256305 Brassica rapa FPsc
Brara.A01346 2.0kb downstream 2.0kb downstream 2000 false A01: 7254306-7256305 Brassica rapa FPsc
Brara.A01346 5.0kb upstream 5.0kb upstream 6036 true A01: 7248270-7254305 Brassica rapa FPsc
Brara.A01346 5.0kb upstream 5.0kb upstream 5000 false A01: 7248270-7253269 Brassica rapa FPsc
Brara.A01346 5.0kb downstream 5.0kb downstream 6036 true A01: 7253270-7259305 Brassica rapa FPsc
Brara.A01346 5.0kb downstream 5.0kb downstream 5000 false A01: 7254306-7259305 Brassica rapa FPsc
Brara.A01346 10.0kb upstream 10.0kb upstream 11036 true A01: 7243270-7254305 Brassica rapa FPsc
Brara.A01346 10.0kb upstream 10.0kb upstream 10000 false A01: 7243270-7253269 Brassica rapa FPsc
Brara.A01346 10.0kb downstream 10.0kb downstream 11036 true A01: 7253270-7264305 Brassica rapa FPsc
Brara.A01346 10.0kb downstream 10.0kb downstream 10000 false A01: 7254306-7264305 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380325 5261 Brassicaceae View MSA
123802655 5264 Brassicales-Malvales View MSA
124349658 5266 SBM View MSA
124251807 5268 Malvidae View MSA
124073271 5270 Rosid View MSA
123752785 5271 Pentapetalae View MSA
122796250 5272 Eudicot View MSA
122050958 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier