Gene : Brara.D00604 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR23151:SF56 - DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT 1 OF PYRUVATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL Genomic Order:  604
Name:  ? Brara.D00604 Secondary Identifier:  ? PAC:30621259
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5173 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5464 Brassica rapa FPsc pathologic  
BrapaFPsc PYRUVDEHYD-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D00604 0.5kb upstream 0.5kb upstream 7083 true A04: 4704197-4711279 Brassica rapa FPsc
Brara.D00604 0.5kb upstream 0.5kb upstream 500 false A04: 4710780-4711279 Brassica rapa FPsc
Brara.D00604 0.5kb downstream 0.5kb downstream 7083 true A04: 4703697-4710779 Brassica rapa FPsc
Brara.D00604 0.5kb downstream 0.5kb downstream 500 false A04: 4703697-4704196 Brassica rapa FPsc
Brara.D00604 1.0kb upstream 1.0kb upstream 7583 true A04: 4704197-4711779 Brassica rapa FPsc
Brara.D00604 1.0kb upstream 1.0kb upstream 1000 false A04: 4710780-4711779 Brassica rapa FPsc
Brara.D00604 1.0kb downstream 1.0kb downstream 7583 true A04: 4703197-4710779 Brassica rapa FPsc
Brara.D00604 1.0kb downstream 1.0kb downstream 1000 false A04: 4703197-4704196 Brassica rapa FPsc
Brara.D00604 2.0kb upstream 2.0kb upstream 8583 true A04: 4704197-4712779 Brassica rapa FPsc
Brara.D00604 2.0kb upstream 2.0kb upstream 2000 false A04: 4710780-4712779 Brassica rapa FPsc
Brara.D00604 2.0kb downstream 2.0kb downstream 8583 true A04: 4702197-4710779 Brassica rapa FPsc
Brara.D00604 2.0kb downstream 2.0kb downstream 2000 false A04: 4702197-4704196 Brassica rapa FPsc
Brara.D00604 5.0kb upstream 5.0kb upstream 11583 true A04: 4704197-4715779 Brassica rapa FPsc
Brara.D00604 5.0kb upstream 5.0kb upstream 5000 false A04: 4710780-4715779 Brassica rapa FPsc
Brara.D00604 5.0kb downstream 5.0kb downstream 11583 true A04: 4699197-4710779 Brassica rapa FPsc
Brara.D00604 5.0kb downstream 5.0kb downstream 5000 false A04: 4699197-4704196 Brassica rapa FPsc
Brara.D00604 10.0kb upstream 10.0kb upstream 16583 true A04: 4704197-4720779 Brassica rapa FPsc
Brara.D00604 10.0kb upstream 10.0kb upstream 10000 false A04: 4710780-4720779 Brassica rapa FPsc
Brara.D00604 10.0kb downstream 10.0kb downstream 16583 true A04: 4694197-4710779 Brassica rapa FPsc
Brara.D00604 10.0kb downstream 10.0kb downstream 10000 false A04: 4694197-4704196 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040991 5273 Angiosperm View MSA
122368166 5261 Brassicaceae View MSA
123836955 5264 Brassicales-Malvales View MSA
124341796 5266 SBM View MSA
124242704 5268 Malvidae View MSA
124066791 5270 Rosid View MSA
123740075 5271 Pentapetalae View MSA
122787937 5272 Eudicot View MSA
121346587 5274 Embryophyte View MSA
123426306 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier