Gene : Brara.F01970 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR11124 - VACUOLAR SORTING PROTEIN VPS29 Genomic Order:  1970
Name:  ? Brara.F01970 Secondary Identifier:  ? PAC:30628034
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.F01970 0.5kb upstream 0.5kb upstream 1686 true A06: 14943272-14944957 Brassica rapa FPsc
Brara.F01970 0.5kb upstream 0.5kb upstream 500 false A06: 14944458-14944957 Brassica rapa FPsc
Brara.F01970 0.5kb downstream 0.5kb downstream 1686 true A06: 14942772-14944457 Brassica rapa FPsc
Brara.F01970 0.5kb downstream 0.5kb downstream 500 false A06: 14942772-14943271 Brassica rapa FPsc
Brara.F01970 1.0kb upstream 1.0kb upstream 2186 true A06: 14943272-14945457 Brassica rapa FPsc
Brara.F01970 1.0kb upstream 1.0kb upstream 1000 false A06: 14944458-14945457 Brassica rapa FPsc
Brara.F01970 1.0kb downstream 1.0kb downstream 2186 true A06: 14942272-14944457 Brassica rapa FPsc
Brara.F01970 1.0kb downstream 1.0kb downstream 1000 false A06: 14942272-14943271 Brassica rapa FPsc
Brara.F01970 2.0kb upstream 2.0kb upstream 3186 true A06: 14943272-14946457 Brassica rapa FPsc
Brara.F01970 2.0kb upstream 2.0kb upstream 2000 false A06: 14944458-14946457 Brassica rapa FPsc
Brara.F01970 2.0kb downstream 2.0kb downstream 3186 true A06: 14941272-14944457 Brassica rapa FPsc
Brara.F01970 2.0kb downstream 2.0kb downstream 2000 false A06: 14941272-14943271 Brassica rapa FPsc
Brara.F01970 5.0kb upstream 5.0kb upstream 6186 true A06: 14943272-14949457 Brassica rapa FPsc
Brara.F01970 5.0kb upstream 5.0kb upstream 5000 false A06: 14944458-14949457 Brassica rapa FPsc
Brara.F01970 5.0kb downstream 5.0kb downstream 6186 true A06: 14938272-14944457 Brassica rapa FPsc
Brara.F01970 5.0kb downstream 5.0kb downstream 5000 false A06: 14938272-14943271 Brassica rapa FPsc
Brara.F01970 10.0kb upstream 10.0kb upstream 11186 true A06: 14943272-14954457 Brassica rapa FPsc
Brara.F01970 10.0kb upstream 10.0kb upstream 10000 false A06: 14944458-14954457 Brassica rapa FPsc
Brara.F01970 10.0kb downstream 10.0kb downstream 11186 true A06: 14933272-14944457 Brassica rapa FPsc
Brara.F01970 10.0kb downstream 10.0kb downstream 10000 false A06: 14933272-14943271 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122350195 5261 Brassicaceae Singleton cluster - no MSA
123789266 5264 Brassicales-Malvales Singleton cluster - no MSA
124287269 5266 SBM Singleton cluster - no MSA
124250664 5268 Malvidae View MSA
124071774 5270 Rosid View MSA
123736460 5271 Pentapetalae View MSA
122787236 5272 Eudicot View MSA
122043646 5273 Angiosperm View MSA
121346806 5274 Embryophyte View MSA
123424212 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier