Gene : Brara.A01402 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR13301:SF51 - CELLULOSE SYNTHASE-LIKE PROTEIN G1-RELATED Genomic Order:  1402
Name:  ? Brara.A01402 Secondary Identifier:  ? PAC:30639586
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-1001 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A01402 0.5kb upstream 0.5kb upstream 3518 true A01: 7738861-7742378 Brassica rapa FPsc
Brara.A01402 0.5kb upstream 0.5kb upstream 500 false A01: 7738861-7739360 Brassica rapa FPsc
Brara.A01402 0.5kb downstream 0.5kb downstream 3518 true A01: 7739361-7742878 Brassica rapa FPsc
Brara.A01402 0.5kb downstream 0.5kb downstream 500 false A01: 7742379-7742878 Brassica rapa FPsc
Brara.A01402 1.0kb upstream 1.0kb upstream 4018 true A01: 7738361-7742378 Brassica rapa FPsc
Brara.A01402 1.0kb upstream 1.0kb upstream 1000 false A01: 7738361-7739360 Brassica rapa FPsc
Brara.A01402 1.0kb downstream 1.0kb downstream 4018 true A01: 7739361-7743378 Brassica rapa FPsc
Brara.A01402 1.0kb downstream 1.0kb downstream 1000 false A01: 7742379-7743378 Brassica rapa FPsc
Brara.A01402 2.0kb upstream 2.0kb upstream 5018 true A01: 7737361-7742378 Brassica rapa FPsc
Brara.A01402 2.0kb upstream 2.0kb upstream 2000 false A01: 7737361-7739360 Brassica rapa FPsc
Brara.A01402 2.0kb downstream 2.0kb downstream 5018 true A01: 7739361-7744378 Brassica rapa FPsc
Brara.A01402 2.0kb downstream 2.0kb downstream 2000 false A01: 7742379-7744378 Brassica rapa FPsc
Brara.A01402 5.0kb upstream 5.0kb upstream 8018 true A01: 7734361-7742378 Brassica rapa FPsc
Brara.A01402 5.0kb upstream 5.0kb upstream 5000 false A01: 7734361-7739360 Brassica rapa FPsc
Brara.A01402 5.0kb downstream 5.0kb downstream 8018 true A01: 7739361-7747378 Brassica rapa FPsc
Brara.A01402 5.0kb downstream 5.0kb downstream 5000 false A01: 7742379-7747378 Brassica rapa FPsc
Brara.A01402 10.0kb upstream 10.0kb upstream 13018 true A01: 7729361-7742378 Brassica rapa FPsc
Brara.A01402 10.0kb upstream 10.0kb upstream 10000 false A01: 7729361-7739360 Brassica rapa FPsc
Brara.A01402 10.0kb downstream 10.0kb downstream 13018 true A01: 7739361-7752378 Brassica rapa FPsc
Brara.A01402 10.0kb downstream 10.0kb downstream 10000 false A01: 7742379-7752378 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377822 5261 Brassicaceae View MSA
123840606 5264 Brassicales-Malvales View MSA
124346924 5266 SBM View MSA
124240954 5268 Malvidae View MSA
124070260 5270 Rosid View MSA
123753400 5271 Pentapetalae View MSA
122797245 5272 Eudicot View MSA
122051318 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier